CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038378.1-P	Field mustard	cytosol	100.0	100.0
CDY66099	Canola	cytosol	100.0	100.0
CDY16429	Canola	cytosol	82.72	82.72
AT1G65970.1	Thale cress	cytosol	80.86	80.86
AT1G65980.1	Thale cress	cytosol	80.86	80.86
AT1G60740.1	Thale cress	cytosol	80.25	80.25
CDY39257	Canola	cytosol	80.25	80.25
CDY07475	Canola	cytosol	80.25	80.25
Zm00001d011581_P001	Maize	plastid	72.84	72.84
EES03426	Sorghum	cytosol	72.84	72.84
TraesCS3B01G304100.1	Wheat	cytosol	70.37	70.37
PGSC0003DMT400013068	Potato	extracellular	70.37	70.37
Os01t0675100-01	Rice	extracellular, plasma membrane, plastid	70.37	70.37
TraesCS3A01G270300.1	Wheat	cytosol	69.75	69.75
VIT_11s0016g03630.t01	Wine grape	cytosol	69.14	69.14
TraesCS3D01G270100.1	Wheat	cytosol	69.14	69.14
Solyc07g020860.2.1	Tomato	plastid	68.52	68.52
KRH48355	Soybean	endoplasmic reticulum, nucleus	67.9	67.9
KRH39322	Soybean	endoplasmic reticulum, nucleus	67.28	67.28
GSMUA_Achr10P...	Banana	extracellular	48.15	64.46
CDY60867	Canola	plastid	80.86	63.59
KRH48905	Soybean	cytosol	29.63	61.54
HORVU3Hr1G062040.1	Barley	mitochondrion	71.6	55.77
CDY68640	Canola	plastid	52.47	51.83
CDX78138	Canola	plastid	54.32	38.26
CDX76246	Canola	plastid	53.7	37.99
CDX73586	Canola	plastid	53.7	37.83
CDY27714	Canola	mitochondrion	30.25	24.38
CDY05226	Canola	mitochondrion	29.63	23.88

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.2	Gene3D:3.40.30.10	GO:A0A078CG85	UniProt:A0A078CG85	EnsemblPlants:CDX75114
ProteinID:CDX75114	ProteinID:CDX75114.1	ProteinID:CDY66099.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00118837001	InterPro:IPR013766	PFAM:PF08534
InterPro:PRX5-like	PFscan:PS51352	PANTHER:PTHR10430	PANTHER:PTHR10430:SF8	InterPro:Redoxin	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI00019AA959	SEG:seg	:	:

Description

BnaC09g25680DBnaA09g54370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078CG85]

Coordinates

chrLK031803:+:428048..429118

Molecular Weight (calculated)

17604.5 Da

IEP (calculated)

6.786

GRAVY (calculated)

0.086

Length

162 amino acids

Sequence
(BLAST)

001: MAPIAVGSVL PDGKIFLFDE NDQLQTVTVH SLLAGKKVIL FGVPGAFTSA CSLQHVPSFI EKADQLKAKG VNEIICYGMN DPYVMKAWGK TFPENKHVKF
101: VSDGSGEYTK LLGLELDLKD KGLGIRTRRF AMLLDNLKVT VANIETGGEF TVSSAEDILK AL

Best Arabidopsis Sequence Match ( AT1G60740.1 )
(BLAST)

001: MAPITVGDVV PDGTISFFDE NDQLQTVSVH SIAAGKKVIL FGVPGAFTPT CSMSHVPGFI GKAEELKSKG IDEIICFSVN DPFVMKAWGK TYQENKHVKF
101: VADGSGEYTH LLGLELDLKD KGLGIRSRRF ALLLDNLKVT VANVENGGEF TVSSAEDILK AL

Arabidopsis Description

PRXIIDAt1g60740 [Source:UniProtKB/TrEMBL;Acc:B4G289]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.