Factsheet for VIT_11s0016g03630.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g03290.t01	Wine grape	cytosol, extracellular, peroxisome	29.01	83.93
PGSC0003DMT400013068	Potato	extracellular	83.33	83.33
AT1G65980.1	Thale cress	cytosol	83.33	83.33
Solyc07g020860.2.1	Tomato	plastid	82.1	82.1
Bra039747.1-P	Field mustard	peroxisome	80.86	80.86
CDY39257	Canola	cytosol	80.25	80.25
CDY16429	Canola	cytosol	80.25	80.25
CDY07475	Canola	cytosol	80.25	80.25
Bra004138.1-P	Field mustard	cytosol	80.25	80.25
TraesCS3D01G270100.1	Wheat	cytosol	79.63	79.63
TraesCS3B01G304100.1	Wheat	cytosol	79.63	79.63
TraesCS3A01G270300.1	Wheat	cytosol	79.63	79.63
AT1G65970.1	Thale cress	cytosol	79.63	79.63
GSMUA_Achr10P...	Banana	extracellular	59.26	79.34
AT1G60740.1	Thale cress	cytosol	79.01	79.01
KRH48355	Soybean	endoplasmic reticulum, nucleus	77.78	77.78
EES03426	Sorghum	cytosol	77.16	77.16
KRH39322	Soybean	endoplasmic reticulum, nucleus	76.54	76.54
Zm00001d011581_P001	Maize	plastid	75.93	75.93
Os01t0675100-01	Rice	extracellular, plasma membrane, plastid	75.31	75.31
CDY66099	Canola	cytosol	69.14	69.14
CDX75114	Canola	cytosol	69.14	69.14
Bra038378.1-P	Field mustard	cytosol	69.14	69.14
KRH48905	Soybean	cytosol	32.1	66.67
CDY60867	Canola	plastid	79.63	62.62
HORVU3Hr1G062040.1	Barley	mitochondrion	76.54	59.62
VIT_08s0007g03970.t01	Wine grape	plastid	56.17	39.74
VIT_05s0020g02850.t01	Wine grape	mitochondrion	35.19	28.36

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.2	EntrezGene:100243939	wikigene:100243939	Gene3D:3.40.30.10	ProteinID:AEL16459
ProteinID:AEL16459.1	ProteinID:AGG09349	ProteinID:AGG09349.1	EMBL:AM433118	ProteinID:CAN73709	ProteinID:CAN73709.1
ProteinID:CBI28043	ProteinID:CBI28043.3	UniProt:D7TBK8	EMBL:FN595756	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0019725	GO:GO:0045454	GO:GO:0051920	GO:GO:0055114	GO:GO:0098869
InterPro:IPR013766	EMBL:JN392720	EMBL:KC195963	EntrezGene:LOC100243939	wikigene:LOC100243939	RefSeq:NP_001268191.1
PFAM:PF08534	InterPro:PRX5-like	PFscan:PS51352	PANTHER:PTHR10430	PANTHER:PTHR10430:SF8	InterPro:Redoxin
SUPFAM:SSF52833	TIGR:TC52579	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI00015C920D	ArrayExpress:VIT_11s0016g03630
EnsemblPlantsGene:VIT_11s0016g03630	EnsemblPlants:VIT_11s0016g03630.t01	unigene:Vvi.8000	:	:	:

Description

Peroxiredoxin [Source:UniProtKB/TrEMBL;Acc:D7TBK8]

Coordinates

chr11:+:2964436..2968009

Molecular Weight (calculated)

17263.7 Da

IEP (calculated)

4.971

GRAVY (calculated)

0.094

Length

162 amino acids

Sequence
(BLAST)

001: MAPIAVGDVI PDGTLAYFDE QDQLQQASVH SLAAGKKVII FGVPGAFTPT CSVKHVPGFI EKAGELKSKG IDEILLVSVN DPFVMKAWAK TYPDNKDVKF
101: LADGSATYTH ALGLELDLSE KGLGTRSRRF ALLVDDLKVK VANVEAGGEF TVSSADDILK AI

Best Arabidopsis Sequence Match ( AT1G65980.1 )
(BLAST)

001: MAPIAVGDVV PDGTISFFDE NDQLQTASVH SLAAGKKVIL FGVPGAFTPT CSMKHVPGFI EKAEELKSKG VDEIICFSVN DPFVMKAWGK TYPENKHVKF
101: VADGSGEYTH LLGLELDLKD KGLGVRSRRF ALLLDDLKVT VANVESGGEF TVSSADDILK AL

Arabidopsis Description

PRXIIBPeroxiredoxin-2B [Source:UniProtKB/Swiss-Prot;Acc:Q9XEX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.