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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, extracellular, cytosol

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • peroxisome 2
  • cytosol 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, extracellular, peroxisome
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:secretory
EpiLoc:peroxisome
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:secretory
WoLF PSORT:extracellular
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_11s0016g03630.t01 Wine grape cytosol 83.93 29.01
VIT_08s0007g03970.t01 Wine grape plastid 60.71 14.85
VIT_05s0020g02850.t01 Wine grape mitochondrion 26.79 7.46
Protein Annotations
ArrayExpress:VIT_09s0002g03290EMBL:FN596494EnsemblPlants:VIT_09s0002g03290.t01EnsemblPlantsGene:VIT_09s0002g03290Gene3D:3.40.30.10InterPro:PRX5-like
InterPro:Thioredoxin-like_sfKEGG:00480+1.11.1.15PANTHER:PTHR10430PANTHER:PTHR10430:SF8ProteinID:CCB59408ProteinID:CCB59408.1
SUPFAM:SSF52833UniParc:UPI0002109FA8UniProt:F6HY85MapMan:10.4.3.2::
Description
No Description!
Coordinates
chr9:-:2997971..2998444
Molecular Weight (calculated)
6122.5 Da
IEP (calculated)
4.289
GRAVY (calculated)
0.282
Length
56 amino acids
Sequence
(BLAST)
1: MALIAVGDVI PEGILTYFDE QDQLQKVIIF GVPGAFTPTC SLKHVPGFIE KEGEMK
Best Arabidopsis Sequence Match ( AT1G65980.1 )
(BLAST)
001: MAPIAVGDVV PDGTISFFDE NDQLQTASVH SLAAGKKVIL FGVPGAFTPT CSMKHVPGFI EKAEELKSKG VDEIICFSVN DPFVMKAWGK TYPENKHVKF
101: VADGSGEYTH LLGLELDLKD KGLGVRSRRF ALLLDDLKVT VANVESGGEF TVSSADDILK AL
Arabidopsis Description
PRXIIBPeroxiredoxin-2B [Source:UniProtKB/Swiss-Prot;Acc:Q9XEX2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.