CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011581_P001	Maize	plastid	98.15	98.15
TraesCS3B01G304100.1	Wheat	cytosol	90.12	90.12
TraesCS3A01G270300.1	Wheat	cytosol	89.51	89.51
Os01t0675100-01	Rice	extracellular, plasma membrane, plastid	88.89	88.89
TraesCS3D01G270100.1	Wheat	cytosol	88.27	88.27
GSMUA_Achr10P...	Banana	extracellular	59.88	80.17
CDY16429	Canola	cytosol	79.63	79.63
Bra039747.1-P	Field mustard	peroxisome	79.01	79.01
AT1G65980.1	Thale cress	cytosol	78.4	78.4
Bra004138.1-P	Field mustard	cytosol	77.78	77.78
CDY07475	Canola	cytosol	77.78	77.78
CDY39257	Canola	cytosol	77.78	77.78
VIT_11s0016g03630.t01	Wine grape	cytosol	77.16	77.16
PGSC0003DMT400013068	Potato	extracellular	77.16	77.16
AT1G65970.1	Thale cress	cytosol	76.54	76.54
KRH48355	Soybean	endoplasmic reticulum, nucleus	75.93	75.93
Solyc07g020860.2.1	Tomato	plastid	75.93	75.93
AT1G60740.1	Thale cress	cytosol	75.93	75.93
KRH39322	Soybean	endoplasmic reticulum, nucleus	74.69	74.69
CDY66099	Canola	cytosol	72.84	72.84
CDX75114	Canola	cytosol	72.84	72.84
Bra038378.1-P	Field mustard	cytosol	72.84	72.84
HORVU3Hr1G062040.1	Barley	mitochondrion	92.59	72.12
KRH48905	Soybean	cytosol	32.72	67.95
CDY60867	Canola	plastid	79.01	62.14
EES06437	Sorghum	plastid	56.79	39.83
KXG20408	Sorghum	plastid	54.94	38.2
OQU86665	Sorghum	mitochondrion	32.1	26.94

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.2	Gene3D:3.40.30.10	EntrezGene:8061850	UniProt:C5XG44	EnsemblPlants:EES03426
ProteinID:EES03426	ProteinID:EES03426.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019725	GO:GO:0045454
GO:GO:0055114	InterPro:IPR013766	PFAM:PF08534	InterPro:PRX5-like	PFscan:PS51352	PANTHER:PTHR10430
PANTHER:PTHR10430:SF8	InterPro:Redoxin	EnsemblPlantsGene:SORBI_3003G254300	SUPFAM:SSF52833	unigene:Sbi.6951	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	UniParc:UPI0001A84B07	RefSeq:XP_002458306.1	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:59273113..59275662

Molecular Weight (calculated)

17380.9 Da

IEP (calculated)

4.782

GRAVY (calculated)

0.017

Length

162 amino acids

Sequence
(BLAST)

001: MAPIAVGDSL PDGQLGWFDE NDQLQQVSVH ALAAGKKVIL FGVPGAFTPT CSNQHVPGFI TQAEQLKAKG VDEILLISVN DPFVMKAWAK TYPENKHVKF
101: LADGSGAYTK ALDLELDLTE KGLGVRSKRF ALLADDLKVT VANIEEGGQF TISGAEEILK AL

Best Arabidopsis Sequence Match ( AT1G65980.1 )
(BLAST)

001: MAPIAVGDVV PDGTISFFDE NDQLQTASVH SLAAGKKVIL FGVPGAFTPT CSMKHVPGFI EKAEELKSKG VDEIICFSVN DPFVMKAWGK TYPENKHVKF
101: VADGSGEYTH LLGLELDLKD KGLGVRSRRF ALLLDDLKVT VANVESGGEF TVSSADDILK AL

Arabidopsis Description

PRXIIBPeroxiredoxin-2B [Source:UniProtKB/Swiss-Prot;Acc:Q9XEX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.