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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 7
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020782.1-P Field mustard mitochondrion 95.02 95.02
CDY05226 Canola mitochondrion 94.53 94.53
CDY27714 Canola mitochondrion 94.53 94.53
TraesCS3A01G183500.1 Wheat mitochondrion 70.15 73.44
Solyc01g079820.2.1 Tomato extracellular 69.15 73.16
PGSC0003DMT400023223 Potato extracellular 69.15 73.16
HORVU3Hr1G037720.1 Barley mitochondrion 69.65 72.54
TraesCS3D01G187600.2 Wheat mitochondrion 69.15 72.02
Os01t0266600-01 Rice mitochondrion 70.15 71.21
KRH11395 Soybean nucleus 69.65 71.07
KRH20884 Soybean mitochondrion 69.65 71.07
Zm00001d040341_P001 Maize mitochondrion 68.16 70.98
TraesCS3B01G213200.2 Wheat mitochondrion 68.16 70.98
OQU86665 Sorghum mitochondrion 67.66 70.47
VIT_05s0020g02850.t01 Wine grape mitochondrion 69.65 69.65
GSMUA_Achr8P09520_001 Banana mitochondrion 68.16 69.54
AT1G65970.1 Thale cress cytosol 25.87 32.1
AT1G60740.1 Thale cress cytosol 25.87 32.1
AT1G65980.1 Thale cress cytosol 25.37 31.48
AT3G52960.1 Thale cress plastid 25.87 22.22
Protein Annotations
KEGG:00480+1.11.1.15MapMan:10.4.3.2Gene3D:3.40.30.10EntrezGene:819778UniProt:A0A178VBA5ProteinID:AAF66133.1
ProteinID:AEE74337.1ArrayExpress:AT3G06050EnsemblPlantsGene:AT3G06050RefSeq:AT3G06050TAIR:AT3G06050RefSeq:AT3G06050-TAIR-G
EnsemblPlants:AT3G06050.1TAIR:AT3G06050.1EMBL:AY052278EMBL:AY085396EMBL:AY098963GO:GO:0003674
GO:GO:0003824GO:GO:0004601GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005739GO:GO:0005759GO:GO:0006950GO:GO:0006979GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016209GO:GO:0016491GO:GO:0019725GO:GO:0045454GO:GO:0046686
GO:GO:0051920GO:GO:0055114GO:GO:0098869InterPro:IPR013766RefSeq:NP_566268.1ProteinID:OAP03607.1
PFAM:PF08534PO:PO:0000005PO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000230
PO:PO:0000293PO:PO:0001016PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001170PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007131PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009001PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025195PO:PO:0025281InterPro:PRX5-likeSymbol:PRXIIFPFscan:PS51352
PANTHER:PTHR10430PANTHER:PTHR10430:SF16UniProt:Q9M7T0InterPro:RedoxinSUPFAM:SSF52833InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domainUniParc:UPI0000131528SEG:seg:::
Description
PRXIIFPRXIIF [Source:UniProtKB/TrEMBL;Acc:A0A178VBA5]
Coordinates
chr3:-:1825999..1827906
Molecular Weight (calculated)
21446.6 Da
IEP (calculated)
9.391
GRAVY (calculated)
-0.104
Length
201 amino acids
Sequence
(BLAST)
001: MAMSILKLRN LSALRSAANS ARIGVSSRGF SKLAEGTDIT SAAPGVSLQK ARSWDEGVSS KFSTTPLSDI FKGKKVVIFG LPGAYTGVCS QQHVPSYKSH
101: IDKFKAKGID SVICVSVNDP FAINGWAEKL GAKDAIEFYG DFDGKFHKSL GLDKDLSAAL LGPRSERWSA YVEDGKVKAV NVEEAPSDFK VTGAEVILGQ
201: I
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.