Factsheet for TraesCS7D01G389700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G325600.1
TraesCS1B01G338800.1
TraesCS1B01G339000.1
TraesCS1D01G327500.1
TraesCS7A01G562100.1
TraesCS7D01G001000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G52960.1	TraesCS1A01G325600.1	AT5G42980.1	15352244
AT3G52960.1	TraesCS1B01G338800.1	AT5G42980.1	15352244
AT3G52960.1	TraesCS1B01G339000.1	AT5G42980.1	15352244
AT3G52960.1	TraesCS1D01G327500.1	AT5G42980.1	15352244
AT3G52960.1	TraesCS7A01G562100.1	AT5G42980.1	15352244
AT3G52960.1	TraesCS7D01G001000.1	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G093020.1	Barley	cytosol, peroxisome	70.0	97.58
TraesCS7A01G394300.1	Wheat	plastid	96.96	96.96
TraesCS7B01G296300.1	Wheat	plastid	90.87	91.27
Os06t0625500-01	Rice	plastid	76.09	75.43
Zm00001d046682_P001	Maize	plastid	75.65	74.68
KRH67837	Soybean	cytosol	43.48	74.63
KXG20408	Sorghum	plastid	73.48	72.53
Bra006963.1-P	Field mustard	plastid	54.78	72.41
CDY68640	Canola	plastid	51.3	71.95
TraesCS6D01G158500.1	Wheat	plastid	66.96	68.14
GSMUA_Achr10P...	Banana	plastid	62.61	62.61
KRG96122	Soybean	nucleus	55.22	59.07
GSMUA_Achr5P15910_001	Banana	plastid	60.43	57.92
Solyc10g083650.1.1	Tomato	plastid	56.96	57.46
PGSC0003DMT400072641	Potato	mitochondrion, plastid	56.52	57.27
CDX76246	Canola	plastid	56.96	57.21
Bra019637.1-P	Field mustard	plastid	56.52	56.77
CDX78138	Canola	plastid	56.52	56.52
AT3G52960.1	Thale cress	plastid	57.39	56.41
TraesCS3D01G270100.1	Wheat	cytosol	39.57	56.17
CDX73586	Canola	plastid	56.09	56.09
VIT_08s0007g03970.t01	Wine grape	plastid	54.78	55.02
PGSC0003DMT400007049	Potato	cytosol, plastid	54.35	53.65
TraesCSU01G031500.1	Wheat	mitochondrion, plastid	46.09	40.93
TraesCS3D01G187600.2	Wheat	mitochondrion	25.65	30.57

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766
PFAM:PF08534	InterPro:PRX5-like	PFscan:PS51352	PANTHER:PTHR10430	PANTHER:PTHR10430:SF15	InterPro:Redoxin
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	EnsemblPlantsGene:TraesCS7D01G389700	EnsemblPlants:TraesCS7D01G389700.1	TIGR:cd03013
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:504769462..504770154

Molecular Weight (calculated)

23680.6 Da

IEP (calculated)

9.242

GRAVY (calculated)

0.191

Length

230 amino acids

Sequence
(BLAST)

001: MATSALATLS ATAAAAGARR VLLSRGPASS LSFASRRLAP AGPLRAGPLP RAATRVLSAT ASPAATTTIA VGDRLPDATL SYFDAPDGEL KMVTVRDLTA
101: GKKVVLFAVP GAFTPTCTQK HLPGFVARAG ELRAKGVDTV ACVSVNDAFV MRAWKESLGV GDEVLLLSDG NGELTRAMGV ELDLSDKPVG LGVRSRRYAL
201: LADDGVVKVL NLEEGGAFTN SSAEDMLKAL

Best Arabidopsis Sequence Match ( AT3G52960.1 )
(BLAST)

001: MATSLSVSRF MSSSATVISV AKPLLSPTVS FTAPLSFTRS LAPNLSLKFR NRRTNSASAT TRSFATTPVT ASISVGDKLP DSTLSYLDPS TGDVKTVTVS
101: SLTAGKKTIL FAVPGAFTPT CSQKHVPGFV SKAGELRSKG IDVIACISVN DAFVMEAWRK DLGINDEVML LSDGNGEFTG KLGVELDLRD KPVGLGVRSR
201: RYAILADDGV VKVLNLEEGG AFTNSSAEDM LKAL

Arabidopsis Description

PRXIIEPeroxiredoxin-2E, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q949U7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.