Factsheet for HORVU7Hr1G093020.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G075560.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G52960.1	HORVU1Hr1G075560.1	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67837	Soybean	cytosol	61.21	75.37
Bra006963.1-P	Field mustard	plastid	76.97	72.99
CDY68640	Canola	plastid	72.12	72.56
TraesCS7B01G296300.1	Wheat	plastid	98.18	70.74
TraesCS7A01G394300.1	Wheat	plastid	98.18	70.43
TraesCS7D01G389700.1	Wheat	plastid	97.58	70.0
Zm00001d046682_P001	Maize	plastid	94.55	66.95
KXG20408	Sorghum	plastid	93.94	66.52
Os06t0625500-01	Rice	plastid	93.33	66.38
HORVU6Hr1G034620.1	Barley	plastid	87.88	64.16
GSMUA_Achr10P...	Banana	plastid	82.42	59.13
KRG96122	Soybean	nucleus	73.33	56.28
Bra019637.1-P	Field mustard	plastid	77.58	55.9
CDX76246	Canola	plastid	77.58	55.9
CDX78138	Canola	plastid	76.97	55.22
PGSC0003DMT400072641	Potato	mitochondrion, plastid	75.76	55.07
GSMUA_Achr5P15910_001	Banana	plastid	80.0	55.0
CDX73586	Canola	plastid	76.36	54.78
AT3G52960.1	Thale cress	plastid	76.97	54.27
Solyc10g083650.1.1	Tomato	plastid	74.55	53.95
PGSC0003DMT400007049	Potato	cytosol, plastid	72.73	51.5
VIT_08s0007g03970.t01	Wine grape	plastid	70.91	51.09
HORVU3Hr1G062040.1	Barley	mitochondrion	53.33	42.31
TraesCSU01G031500.1	Wheat	mitochondrion, plastid	50.3	32.05
HORVU3Hr1G037720.1	Barley	mitochondrion	32.73	27.98

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.2	Gene3D:3.40.30.10	UniProt:A0A287XCN1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:HORVU7Hr1G093020	EnsemblPlants:HORVU7Hr1G093020.1	InterPro:IPR013766
PFAM:PF08534	InterPro:PRX5-like	PFscan:PS51352	PANTHER:PTHR10430	PANTHER:PTHR10430:SF15	InterPro:Redoxin
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI000B46659B	:	:

Description

No Description!

Coordinates

chrchr7H:+:569256990..569258272

Molecular Weight (calculated)

17339.8 Da

IEP (calculated)

4.671

GRAVY (calculated)

0.112

Length

165 amino acids

Sequence
(BLAST)

001: ATAIAVGDRL PDATLSYFDS PDGELKTVTV RDLTAGKKVV LFAVPGAFTP TCTQKHLPGF VARAGELRAK GVDTVACVSV NDAFVMRAWK ESLGVGDEVL
101: LLSDGNGELT RAMGVELDLS DKPVGLGVRS RRYALLADDG VVKVLNLEEG GAFTNSSAED MLKAL

Best Arabidopsis Sequence Match ( AT3G52960.1 )
(BLAST)

001: MATSLSVSRF MSSSATVISV AKPLLSPTVS FTAPLSFTRS LAPNLSLKFR NRRTNSASAT TRSFATTPVT ASISVGDKLP DSTLSYLDPS TGDVKTVTVS
101: SLTAGKKTIL FAVPGAFTPT CSQKHVPGFV SKAGELRSKG IDVIACISVN DAFVMEAWRK DLGINDEVML LSDGNGEFTG KLGVELDLRD KPVGLGVRSR
201: RYAILADDGV VKVLNLEEGG AFTNSSAEDM LKAL

Arabidopsis Description

PRXIIEPeroxiredoxin-2E, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q949U7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.