Factsheet for GSMUA_Achr10P11170_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
peroxisome 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	nucleus, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G093020.1	Barley	cytosol, peroxisome	59.13	82.42
KRH67837	Soybean	cytosol	46.52	79.85
Bra006963.1-P	Field mustard	plastid	59.13	78.16
CDY68640	Canola	plastid	52.61	73.78
TraesCS6D01G158500.1	Wheat	plastid	65.65	66.81
TraesCS6A01G169100.1	Wheat	plastid	65.65	66.81
HORVU6Hr1G034620.1	Barley	plastid	65.65	66.81
TraesCS6B01G197100.1	Wheat	plastid	65.22	66.37
GSMUA_Achr5P15910_001	Banana	plastid	68.7	65.83
Os02t0192700-02	Rice	plastid	63.91	65.33
KRG96122	Soybean	nucleus	60.0	64.19
TraesCS7B01G296300.1	Wheat	plastid	62.61	62.88
TraesCS7D01G389700.1	Wheat	plastid	62.61	62.61
TraesCS7A01G394300.1	Wheat	plastid	62.61	62.61
CDX78138	Canola	plastid	62.17	62.17
KXG20408	Sorghum	plastid	62.61	61.8
Zm00001d046682_P001	Maize	plastid	61.74	60.94
CDX73586	Canola	plastid	60.87	60.87
AT3G52960.1	Thale cress	plastid	61.74	60.68
EES06437	Sorghum	plastid	60.87	60.61
Os06t0625500-01	Rice	plastid	60.87	60.34
PGSC0003DMT400072641	Potato	mitochondrion, plastid	59.13	59.91
VIT_08s0007g03970.t01	Wine grape	plastid	59.57	59.83
GSMUA_Achr10P...	Banana	extracellular	31.3	59.5
Bra019637.1-P	Field mustard	plastid	59.13	59.39
Solyc10g083650.1.1	Tomato	plastid	58.7	59.21
CDX76246	Canola	plastid	58.7	58.95
PGSC0003DMT400007049	Potato	cytosol, plastid	57.83	57.08
TraesCSU01G031500.1	Wheat	mitochondrion, plastid	33.91	30.12
GSMUA_Achr8P09520_001	Banana	mitochondrion	25.22	29.44

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019725
GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr10G11170_001	EnsemblPlants:GSMUA_Achr10P11170_001	EnsemblPlants:GSMUA_Achr10T11170_001	InterPro:IPR013766
UniProt:M0RH93	PFAM:PF08534	InterPro:PRX5-like	PFscan:PS51352	PANTHER:PTHR10430	PANTHER:PTHR10430:SF29
InterPro:Redoxin	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI00029514E3	SEG:seg

Description

Peroxiredoxin-2E, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr10G11170_001]

Coordinates

chr10:+:20754837..20755888

Molecular Weight (calculated)

24185.4 Da

IEP (calculated)

9.749

GRAVY (calculated)

0.203

Length

230 amino acids

Sequence
(BLAST)

001: MATSVAAKLV APVSLSSSVV RLVPAVAAAA RIPRLHSPAV APLRLRARRP ATYPRFFASS VSAPATSATI SIGDKLPDAT LSYFGADGEL KTVTVSELTK
101: GKKAVLFAVP GAFTPTCSQK HLPGFVEKAG ELRAKGVDTI ACISVNDAFV MRAWKEDLKI GDEVLLLADG NGEFTKALGV ELDLRDKPVG LGVRSRRYAM
201: LADDGVVKVL NLEEGGAFTF SSADDMLKAL

Best Arabidopsis Sequence Match ( AT3G52960.1 )
(BLAST)

001: MATSLSVSRF MSSSATVISV AKPLLSPTVS FTAPLSFTRS LAPNLSLKFR NRRTNSASAT TRSFATTPVT ASISVGDKLP DSTLSYLDPS TGDVKTVTVS
101: SLTAGKKTIL FAVPGAFTPT CSQKHVPGFV SKAGELRSKG IDVIACISVN DAFVMEAWRK DLGINDEVML LSDGNGEFTG KLGVELDLRD KPVGLGVRSR
201: RYAILADDGV VKVLNLEEGG AFTNSSAEDM LKAL

Arabidopsis Description

PRXIIEPeroxiredoxin-2E, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q949U7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.