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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
  • peroxisome 1
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, peroxisome, plastid
BaCelLo:plastid
EpiLoc:peroxisome
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:mitochondrion, nucleus, plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
plastid: 17189339
plasma membrane: 27800704
plastid: 27992503
extracellular: 28232208
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 17189339 doi
T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky
Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.
msms PMID: 28232208 doi
Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G158500.1 Wheat plastid 82.67 82.3
TraesCS6B01G197100.1 Wheat plastid 82.22 81.86
TraesCS6A01G169100.1 Wheat plastid 82.22 81.86
HORVU6Hr1G034620.1 Barley plastid 79.56 79.2
EES06437 Sorghum plastid 78.22 76.19
Bra006963.1-P Field mustard plastid 56.89 73.56
KRH67837 Soybean cytosol 43.56 73.13
CDY68640 Canola plastid 50.67 69.51
Os06t0625500-01 Rice plastid 67.56 65.52
GSMUA_Achr10P... Banana plastid 65.33 63.91
KRG96122 Soybean nucleus 57.78 60.47
Os01t0675100-01 Rice extracellular, plasma membrane, plastid 43.11 59.88
CDX78138 Canola plastid 60.44 59.13
CDX73586 Canola plastid 59.11 57.83
Solyc10g083650.1.1 Tomato plastid 57.78 57.02
AT3G52960.1 Thale cress plastid 59.11 56.84
PGSC0003DMT400072641 Potato mitochondrion, plastid 56.89 56.39
Bra019637.1-P Field mustard plastid 56.89 55.9
GSMUA_Achr5P15910_001 Banana plastid 59.56 55.83
CDX76246 Canola plastid 56.44 55.46
VIT_08s0007g03970.t01 Wine grape plastid 54.22 53.28
PGSC0003DMT400007049 Potato cytosol, plastid 53.78 51.93
Os01t0266600-01 Rice mitochondrion 23.56 26.77
Protein Annotations
KEGG:00480+1.11.1.15MapMan:10.4.3.2Gene3D:3.40.30.10EntrezGene:4328586EMBL:AK061629EMBL:AK065909
ProteinID:BAD15391.1ProteinID:BAD34026.1ProteinID:BAF08079.1ProteinID:BAS77421.1GO:GO:0003674GO:GO:0003824
GO:GO:0004601GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150
GO:GO:0008152GO:GO:0009507GO:GO:0009536GO:GO:0009570GO:GO:0009987GO:GO:0016209
GO:GO:0016491GO:GO:0019725GO:GO:0045454GO:GO:0051920GO:GO:0055114GO:GO:0098869
InterPro:IPR013766EnsemblPlantsGene:Os02g0192700EnsemblPlants:Os02t0192700-02PFAM:PF08534InterPro:PRX5-likePFscan:PS51352
PANTHER:PTHR10430PANTHER:PTHR10430:SF15UniProt:Q7F8S5InterPro:RedoxinSUPFAM:SSF52833InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domainUniParc:UPI00000AA67CRefSeq:XP_015623954.1SEG:seg::
Description
peroxiredoxin IIE2Similar to Thioredoxin peroxidase. (Os02t0192700-02)
Coordinates
chr2:-:5166998..5167991
Molecular Weight (calculated)
23180.8 Da
IEP (calculated)
6.535
GRAVY (calculated)
0.231
Length
225 amino acids
Sequence
(BLAST)
001: MAAPTAAALS TLSTASVTSG KRFITSSFSL SFSSRPLATG VRAAGARAAR RSAASASTVV ATIAVGDKLP DATLSYFDPA DGELKTVTVA ELTAGRKAVL
101: FAVPGAFTPT CSQKHLPGFI EKAGELHAKG VDAIACVSVN DAFVMRAWKE SLGLGDADVL LLSDGNLELT RALGVEMDLS DKPMGLGVRS RRYALLADDG
201: VVKVLNLEEG GAFTTSSAEE MLKAL
Best Arabidopsis Sequence Match ( AT3G52960.1 )
(BLAST)
001: MATSLSVSRF MSSSATVISV AKPLLSPTVS FTAPLSFTRS LAPNLSLKFR NRRTNSASAT TRSFATTPVT ASISVGDKLP DSTLSYLDPS TGDVKTVTVS
101: SLTAGKKTIL FAVPGAFTPT CSQKHVPGFV SKAGELRSKG IDVIACISVN DAFVMEAWRK DLGINDEVML LSDGNGEFTG KLGVELDLRD KPVGLGVRSR
201: RYAILADDGV VKVLNLEEGG AFTNSSAEDM LKAL
Arabidopsis Description
PRXIIEPeroxiredoxin-2E, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q949U7]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.