Factsheet for GSMUA_Achr5P16000_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 1
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P16010_001	Banana	cytosol	74.17	95.73
HORVU6Hr1G026770.1	Barley	extracellular, mitochondrion, plastid	49.01	61.67
TraesCS5B01G331500.2	Wheat	cytosol	54.97	60.58
TraesCS2D01G273600.1	Wheat	cytosol, mitochondrion, plastid	68.87	57.14
HORVU2Hr1G082740.6	Barley	cytosol, plastid	66.89	56.11
TraesCS4A01G349500.1	Wheat	cytosol	70.2	53.0
OQU82703	Sorghum	plastid	50.33	49.35
TraesCS5A01G331200.1	Wheat	cytosol	67.55	44.16
Solyc09g097950.1.1	Tomato	cytosol	42.38	42.95
Bra027135.1-P	Field mustard	cytosol, mitochondrion, nucleus	69.54	41.18
Os04t0337800-00	Rice	mitochondrion	70.2	41.09
Bra027139.1-P	Field mustard	cytosol	67.55	40.32
Bra027138.1-P	Field mustard	cytosol	66.89	40.08
GSMUA_Achr5P16020_001	Banana	cytosol	91.39	34.94
TraesCS2A01G274800.1	Wheat	cytosol	77.48	33.72
KRH45230	Soybean	nucleus	76.16	33.63
KRH55515	Soybean	cytosol	76.16	33.53
HORVU2Hr1G066920.7	Barley	cytosol	77.48	33.52
TraesCS2B01G292100.1	Wheat	cytosol	76.82	33.43
EER87770	Sorghum	cytosol	76.16	33.24
TraesCS2D01G273400.1	Wheat	cytosol	76.16	33.14
Bra027140.1-P	Field mustard	cytosol, nucleus, peroxisome	72.85	32.93
AT1G60710.1	Thale cress	cytosol	74.83	32.75
Zm00001d031666_P002	Maize	extracellular	74.83	32.66
Os04t0338000-01	Rice	plasma membrane	74.83	32.19
TraesCS5D01G336900.1	Wheat	golgi, plastid	73.51	31.71
KRH55516	Soybean	cytosol	72.19	31.69
TraesCS5B01G523200.1	Wheat	cytosol	71.52	31.4
TraesCS2A01G274700.1	Wheat	cytosol, mitochondrion, peroxisome	71.52	31.21
TraesCS5D01G522300.1	Wheat	cytosol	72.19	31.14
AT1G60690.1	Thale cress	cytosol	70.86	31.01
AT1G60680.1	Thale cress	cytosol, mitochondrion	70.86	30.92
Os04t0337500-01	Rice	plasma membrane	70.86	30.57
TraesCS2B01G355900.1	Wheat	cytosol, mitochondrion	70.2	30.55
EER97210	Sorghum	cytosol, mitochondrion	70.2	30.37
Bra031486.1-P	Field mustard	cytosol	67.55	30.36
AT1G60750.1	Thale cress	cytosol	66.23	30.3
CDY70614	Canola	cytosol	67.55	30.27
TraesCS2A01G326100.1	Wheat	mitochondrion	69.54	30.26
TraesCS2D01G336700.1	Wheat	cytosol	69.54	30.26
TraesCS2D01G336900.1	Wheat	cytosol, mitochondrion	67.55	29.65
AT1G10810.1	Thale cress	mitochondrion, peroxisome, plastid	67.55	29.65
TraesCS2A01G325800.2	Wheat	cytosol, mitochondrion	69.54	29.58
AT1G60730.3	Thale cress	cytosol	70.86	29.32
Zm00001d036024_P001	Maize	extracellular, mitochondrion	76.16	29.04
Bra027142.1-P	Field mustard	cytosol	70.2	28.88
Bra027134.1-P	Field mustard	cytosol	64.9	28.74
TraesCS2D01G336800.1	Wheat	cytosol, mitochondrion	68.21	28.45
Bra031485.1-P	Field mustard	cytosol, mitochondrion	66.89	28.06
EER97869	Sorghum	cytosol	65.56	28.05
KXG19188	Sorghum	cytosol	72.19	28.02
OQU76240	Sorghum	mitochondrion	65.56	27.89
TraesCS6D01G127900.1	Wheat	mitochondrion	65.56	27.5
Zm00001d006365_P001	Maize	mitochondrion	72.85	27.03
Os04t0339400-01	Rice	plasma membrane	60.26	25.63
GSMUA_Achr8P20540_001	Banana	cytosol	36.42	24.12
TraesCS2B01G356100.1	Wheat	cytosol	47.02	23.51
GSMUA_Achr9P10640_001	Banana	cytosol	54.3	23.5
CDY34675	Canola	cytosol	29.8	21.33
GSMUA_Achr8P26850_001	Banana	mitochondrion	49.01	21.14
CDY34139	Canola	cytosol	33.77	20.16
PGSC0003DMT400042838	Potato	cytosol	41.06	13.81
HORVU6Hr1G026790.4	Barley	plastid	23.84	12.77
GSMUA_Achr4P31780_001	Banana	mitochondrion	29.14	11.86
GSMUA_Achr2P02520_001	Banana	extracellular, plasma membrane	27.81	11.76
GSMUA_Achr3P18270_001	Banana	plastid	27.81	11.11
GSMUA_Achr4P04780_001	Banana	plastid	27.15	9.69
GSMUA_Achr3P27400_001	Banana	mitochondrion	19.21	9.57
GSMUA_Achr9P23530_001	Banana	mitochondrion	19.21	9.57
VIT_05s0062g00990.t01	Wine grape	cytosol, extracellular	1.32	1.32
KRG94634	Soybean	cytosol	0.0	0.0
GSMUA_Achr5P03020_001	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr5P16000_001	EnsemblPlants:GSMUA_Achr5T16000_001	EnsemblPlantsGene:GSMUA_Achr5G16000_001	Gene3D:3.20.20.100	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	PANTHER:PTHR43625	PANTHER:PTHR43625:SF18	PFAM:PF00248	SUPFAM:SSF51430	UniParc:UPI0002966EC5
UniProt:M0SYX9	MapMan:35.1	:	:	:	:

Description

IN2-2 protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G16000_001]

Coordinates

chr5:+:12539056..12540054

Molecular Weight (calculated)

16381.7 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.128

Length

151 amino acids

Sequence
(BLAST)

001: MAREAGSGND GGVIVGRMKL GSQGLEVSRQ GLGCMGMSAF YGPPKPDTDM IALIHYAIRS GVTFFDTSDI YGPFTNEILL GKALQGGVRE KVELATKFGI
101: SFQDGKREIR GDPAYVRAAC ESSLQRLGID CIDLYYQHRV DTRVPIEVTV S

Best Arabidopsis Sequence Match ( AT1G60710.1 )
(BLAST)

001: MAEACGVRRM KLGSQGLEVS AQGLGCMGLS AFYGAPKPEN EAIALIHHAI HSGVTLLDTS DIYGPETNEV LLGKALKDGV REKVELATKF GISYAEGKRE
101: VRGDPEYVRA ACEASLKRLD IACIDLYYQH RVDTRVPIEI TMGELKKLVE EGKIKYIGLS EASASTIRRA HAVHPITAVQ IEWSLWTRDV EEEIIPTCRE
201: LGIGIVAYSP LGRGFFASGP KLVENLEKDD FRKALPRFQE ENLDHNKIVY EKVCAISEKK GCTPGQLALA WVHHQGDDVC PIPGTTKIEN LKQNIGALSV
301: KLTPEEMTEL EAIAQPGFVK GDRYSNMIPT FKNAETPPLS AWKAA

Arabidopsis Description

ATB2Probable aldo-keto reductase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZN2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.