CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94634	Soybean	cytosol	16.6	63.64
VIT_05s0062g00950.t01	Wine grape	cytosol	48.62	61.5
CDY70614	Canola	cytosol	81.82	61.42
TraesCS2B01G356000.1	Wheat	cytosol	43.87	54.41
AT1G60750.1	Thale cress	cytosol	70.75	54.24
TraesCS2B01G356100.1	Wheat	cytosol	62.06	51.99
TraesCS5B01G331500.2	Wheat	cytosol	28.06	51.82
KRH55515	Soybean	cytosol	69.96	51.6
KRH45230	Soybean	nucleus	69.57	51.46
Solyc09g097960.2.1	Tomato	cytosol	69.57	50.87
EER87770	Sorghum	cytosol	69.57	50.87
Os04t0338000-01	Rice	plasma membrane	69.17	49.86
Solyc09g097980.2.1	Tomato	cytosol, extracellular	69.17	49.86
Solyc09g097970.2.1	Tomato	cytosol, extracellular	67.98	49.71
Zm00001d031666_P002	Maize	extracellular	67.59	49.42
TraesCS2A01G274800.1	Wheat	cytosol	67.59	49.28
TraesCS2B01G292100.1	Wheat	cytosol	67.19	48.99
HORVU2Hr1G066920.7	Barley	cytosol	67.19	48.71
TraesCS2D01G273400.1	Wheat	cytosol	66.8	48.7
TraesCS5B01G523200.1	Wheat	cytosol	66.01	48.55
VIT_05s0062g00990.t01	Wine grape	cytosol, extracellular	28.85	48.34
KRH55516	Soybean	cytosol	65.61	48.26
TraesCS2A01G274700.1	Wheat	cytosol, mitochondrion, peroxisome	65.61	47.98
EER97869	Sorghum	cytosol	66.4	47.59
Solyc09g098000.2.1	Tomato	cytosol	65.61	47.56
EER97210	Sorghum	cytosol, mitochondrion	65.61	47.56
HORVU6Hr1G026790.4	Barley	plastid	52.96	47.52
Os04t0337500-01	Rice	plasma membrane	65.61	47.43
OQU76240	Sorghum	mitochondrion	66.4	47.32
TraesCS5D01G336900.1	Wheat	golgi, plastid	65.22	47.14
TraesCS5D01G522300.1	Wheat	cytosol	64.03	46.29
TraesCS2D01G273600.1	Wheat	cytosol, mitochondrion, plastid	33.2	46.15
TraesCS2D01G336700.1	Wheat	cytosol	63.24	46.11
Os04t0339400-01	Rice	plasma membrane	64.43	45.92
HORVU2Hr1G082700.1	Barley	extracellular	48.22	45.86
TraesCS2A01G326100.1	Wheat	mitochondrion	62.85	45.82
TraesCS2B01G355900.1	Wheat	cytosol, mitochondrion	62.45	45.53
KXG19188	Sorghum	cytosol	69.17	44.99
TraesCS2D01G336900.1	Wheat	cytosol, mitochondrion	60.87	44.77
GSMUA_Achr5P16010_001	Banana	cytosol	20.55	44.44
TraesCS2A01G325800.2	Wheat	cytosol, mitochondrion	61.66	43.94
GSMUA_Achr5P16020_001	Banana	cytosol	67.98	43.54
OQU82702	Sorghum	mitochondrion	19.76	43.1
TraesCS4A01G349500.1	Wheat	cytosol	33.99	43.0
Zm00001d036024_P001	Maize	extracellular, mitochondrion	67.19	42.93
TraesCS6D01G127900.1	Wheat	mitochondrion	60.87	42.78
TraesCS2D01G336800.1	Wheat	cytosol, mitochondrion	60.47	42.27
CDY34675	Canola	cytosol	34.78	41.71
Zm00001d006365_P001	Maize	mitochondrion	65.22	40.54
TraesCS5A01G331200.1	Wheat	cytosol	33.2	36.36
GSMUA_Achr5P16000_001	Banana	cytosol, nucleus, plastid	20.16	33.77
Os04t0337800-00	Rice	mitochondrion	34.39	33.72
HORVU2Hr1G082740.6	Barley	cytosol, plastid	19.37	27.22
PGSC0003DMT400042838	Potato	cytosol	41.9	23.61
HORVU6Hr1G026770.1	Barley	extracellular, mitochondrion, plastid	9.09	19.17
OQU82703	Sorghum	plastid	11.07	18.18
CDY18231	Canola	cytosol	26.88	16.46
CDY15588	Canola	plastid	24.51	16.45
CDX86514	Canola	plastid	24.51	16.45
CDY15518	Canola	mitochondrion	20.95	16.16
CDX86614	Canola	mitochondrion	20.95	16.16
CDY18250	Canola	cytosol	20.55	15.85
CDX89797	Canola	cytosol, mitochondrion, plastid	20.55	15.85
CDY14368	Canola	plastid	22.53	15.79
CDY20245	Canola	plastid	22.53	15.75
CDX89825	Canola	plastid	27.27	15.07
Solyc09g097950.1.1	Tomato	cytosol	5.93	10.07
CDY18564	Canola	extracellular, plasma membrane	12.65	8.82

Protein Annotations

EnsemblPlants:CDY34139	EnsemblPlantsGene:GSBRNA2T00056104001	Gene3D:3.20.20.100	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf
PANTHER:PTHR43625	PANTHER:PTHR43625:SF18	PFAM:PF00248	ProteinID:CDY34139	ProteinID:CDY34139.1	SUPFAM:SSF51430
UniParc:UPI0004EDEED4	UniProt:A0A078H9H4	MapMan:50.1.1	:	:	:

Description

BnaC01g28790DBnaC01g28790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9H4]

Coordinates

chrLK032329:-:344853..346115

Molecular Weight (calculated)

27955.6 Da

IEP (calculated)

6.255

GRAVY (calculated)

-0.221

Length

253 amino acids

Sequence
(BLAST)

001: MSALKDGLRE KVELATKFGL VTSEDGKLGF RGDPNYVRSA CEASLRRLGV TCIDLYYQHR IDTTVPIEVT MGELKKLVEE GKIKYIGLSE ASASTIRRAH
101: AVHPITALQI EWSLSSRDVE EYIIPTCREL GIGIVAYSPL GRGFLASGTK LVENLEQGDP RKASTRLIHY SVPSYHLLGG EPTQELVCPI PGTTKIENLN
201: QNIGALSVKL TPGDMAELEA IARPDFVKGE RYWDIITTYD HAETPPLSSW KQV

Best Arabidopsis Sequence Match ( AT1G60750.1 )
(BLAST)

001: MAEEACQVRR MKLGSQGLEV SAQGLGCMGL SDFYGAPTPE TNAVALLRHA INAGVTFLDT SDIYGPETNE LLLGKALKDG LRDKVELATK FGITASEDGK
101: FGFRGDPEYV RIACEASLKR LGVTCIDLYY QHRIDTTLPI EITIGELKKL VEEGKIKYIG LSEASASTIR RAHAVHPITA VQIEWSLWSR DVEEDIIPTC
201: RELGIGIVAY SPLGRGFLGL PRFQQENLEN NKILYEKVQA MATKKSCTPA QLALAWVHHQ GDDVCPIPGT SKIQNLNQNI GALSVKLTPE EMVELEAIAQ
301: PDFVKGERYD NNMVTYKDSE TPPLSSWKAR

Arabidopsis Description

Probable aldo-keto reductase 6 [Source:UniProtKB/Swiss-Prot;Acc:F4HPY8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.