CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
peroxisome 1
cytosol 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003045.1-P	Field mustard	plastid	98.89	98.89
CDY20245	Canola	plastid	96.68	96.41
AT5G53580.1	Thale cress	plastid	92.8	91.78
VIT_16s0098g01180.t01	Wine grape	cytosol, nucleus, peroxisome	71.75	79.94
KRH53587	Soybean	plastid	77.84	77.84
PGSC0003DMT400047623	Potato	plastid	74.79	72.97
Solyc03g082560.2.1	Tomato	nucleus	73.96	72.16
Os10t0517400-01	Rice	plasma membrane	72.85	70.13
TraesCS1D01G184400.1	Wheat	plastid	72.3	69.6
TraesCS1B01G199700.1	Wheat	plastid	72.02	69.33
TraesCS1A01G180800.1	Wheat	plastid	71.75	69.07
EER93936	Sorghum	plastid	70.64	68.73
GSMUA_Achr3P18270_001	Banana	plastid	71.75	68.52
HORVU1Hr1G047820.1	Barley	cytosol, peroxisome, plastid	71.19	60.76
CDX86514	Canola	plastid	37.67	36.07
CDY15588	Canola	plastid	37.67	36.07
CDY34675	Canola	cytosol	16.34	27.96
CDY70614	Canola	cytosol	24.65	26.41
CDY15518	Canola	mitochondrion	21.88	24.09
CDX86614	Canola	mitochondrion	21.61	23.78
CDY18250	Canola	cytosol	21.61	23.78
CDX89797	Canola	cytosol, mitochondrion, plastid	21.61	23.78
CDY34139	Canola	cytosol	15.79	22.53
CDY18231	Canola	cytosol	21.61	18.89
CDX89825	Canola	plastid	22.16	17.47
CDY18564	Canola	extracellular, plasma membrane	10.8	10.74

Protein Annotations

Gene3D:3.20.20.100	MapMan:35.1	GO:A0A078FPV2	UniProt:A0A078FPV2	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase
EnsemblPlants:CDY14368	ProteinID:CDY14368	ProteinID:CDY14368.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00078995001	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PRINTS:PR00069	ScanProsite:PS00062	PANTHER:PTHR43625	PANTHER:PTHR43625:SF5
SUPFAM:SSF51430	UniParc:UPI0004EEABC3	:	:	:	:

Description

BnaA10g06870DBnaA10g06870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FPV2]

Coordinates

chrLK032042:+:425417..427138

Molecular Weight (calculated)

40210.7 Da

IEP (calculated)

9.113

GRAVY (calculated)

-0.170

Length

361 amino acids

Sequence
(BLAST)

001: MALTLSTTKT FTNINCSNTT SFKPLKLPLF WPWQKVKMGP LNVSPMGFGT WAWGNQLLWG YQTSMDDQLQ QAFELALENG INLFDTADSY GTGRLNGQSE
101: RLLGQFIKQS RALKGKQNEV VIATKFAAYP WRLTSGQFVN ACSASLDRLQ IDQLGIGQLH WSTANYAPLQ ELALWDGLVA MYEKGLVRAV GVSNYGPQQL
201: VKIHDYLKTR GVPLCSAQVQ FSLLSYGKEQ QEIKRVCDEL GIRLISYSPL GLGMLTGKYS SSELPTGPRS LLFGQILPGL DPLLVALREI AEKRGKTMPQ
301: VAINWCICKG TVPIPGIKSV RHVEDNLGAM GWRLTNDEQL QLEYAAQESP RSMIQNIFQT R

Best Arabidopsis Sequence Match ( AT5G53580.1 )
(BLAST)

001: MALTLSTTKT FTNINCSNNT SNITTFKPLK LPLFWPWQKV KMGPLSVSPM GFGTWAWGNQ LLWGYQTSMD DQLQQAFELA LENGINLFDT ADSYGTGRLN
101: GQSERLLGKF IKESQGLKGK QNEVVVATKF AAYPWRLTSG QFVNACRASL DRLQIDQLGI GQLHWSTASY APLQELVLWD GLVQMYEKGL VRAVGVSNYG
201: PQQLVKIHDY LKTRGVPLCS AQVQFSLLSM GKEQLEIKSI CDELGIRLIS YSPLGLGMLT GKYSSSKLPT GPRSLLFRQI LPGLEPLLLA LSEIAKKRGK
301: TMPQVAINWC ICKGTVPIPG IKSVRHVEDN LGALGWKLTN DEQLQLEYAA KESPKSMIQN IFQTR

Arabidopsis Description

PLR1Pyridoxal reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q56Y42]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.