Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- peroxisome 1
- cytosol 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003045.1-P | Field mustard | plastid | 92.05 | 93.07 |
| CDY14368 | Canola | plastid | 91.78 | 92.8 |
| CDY20245 | Canola | plastid | 90.96 | 91.71 |
| VIT_16s0098g01180.t01 | Wine grape | cytosol, nucleus, peroxisome | 71.78 | 80.86 |
| KRH53587 | Soybean | plastid | 76.99 | 77.84 |
| PGSC0003DMT400047623 | Potato | plastid | 74.25 | 73.24 |
| Solyc03g082560.2.1 | Tomato | nucleus | 73.97 | 72.97 |
| TraesCS1D01G184400.1 | Wheat | plastid | 73.15 | 71.2 |
| Os10t0517400-01 | Rice | plasma membrane | 72.88 | 70.93 |
| TraesCS1B01G199700.1 | Wheat | plastid | 72.6 | 70.67 |
| TraesCS1A01G180800.1 | Wheat | plastid | 72.33 | 70.4 |
| EER93936 | Sorghum | plastid | 70.41 | 69.27 |
| GSMUA_Achr3P18270_001 | Banana | plastid | 71.23 | 68.78 |
| HORVU1Hr1G047820.1 | Barley | cytosol, peroxisome, plastid | 72.05 | 62.17 |
| AT1G06690.1 | Thale cress | plastid | 37.53 | 36.34 |
| AT1G60680.1 | Thale cress | cytosol, mitochondrion | 26.58 | 28.03 |
| AT1G60750.1 | Thale cress | cytosol | 25.21 | 27.88 |
| AT1G60690.1 | Thale cress | cytosol | 26.03 | 27.54 |
| AT1G60710.1 | Thale cress | cytosol | 26.03 | 27.54 |
| AT1G10810.1 | Thale cress | mitochondrion, peroxisome, plastid | 25.21 | 26.74 |
| AT1G60730.3 | Thale cress | cytosol | 24.93 | 24.93 |
| AT1G04690.1 | Thale cress | cytosol | 21.64 | 24.09 |
| AT1G04420.1 | Thale cress | plastid | 21.37 | 18.93 |
Protein Annotations
| Gene3D:3.20.20.100 | MapMan:35.1 | EntrezGene:835440 | ProteinID:AED96380.1 | EMBL:AK221481 | ArrayExpress:AT5G53580 |
| EnsemblPlantsGene:AT5G53580 | RefSeq:AT5G53580 | TAIR:AT5G53580 | RefSeq:AT5G53580-TAIR-G | EnsemblPlants:AT5G53580.1 | TAIR:AT5G53580.1 |
| InterPro:Aldo/ket_reductase_CS | InterPro:Aldo/keto_reductase | Unigene:At.29548 | ProteinID:BAB09734.1 | EMBL:BT012653 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009443 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0042820 | GO:GO:0042821 |
| GO:GO:0050236 | GO:GO:0055114 | GO:GO:0070402 | InterPro:IPR036812 | InterPro:NADP_OxRdtase_dom | InterPro:NADP_OxRdtase_dom_sf |
| RefSeq:NP_200170.2 | PFAM:PF00248 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00069 | ScanProsite:PS00062 | PANTHER:PTHR43625 | PANTHER:PTHR43625:SF5 |
| UniProt:Q56Y42 | SUPFAM:SSF51430 | UniParc:UPI00001970D6 | SEG:seg | : | : |
Description
PLR1Pyridoxal reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q56Y42]
Coordinates
chr5:-:21764937..21767013
Molecular Weight (calculated)
40578.4 Da
IEP (calculated)
9.671
GRAVY (calculated)
-0.142
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MALTLSTTKT FTNINCSNNT SNITTFKPLK LPLFWPWQKV KMGPLSVSPM GFGTWAWGNQ LLWGYQTSMD DQLQQAFELA LENGINLFDT ADSYGTGRLN
101: GQSERLLGKF IKESQGLKGK QNEVVVATKF AAYPWRLTSG QFVNACRASL DRLQIDQLGI GQLHWSTASY APLQELVLWD GLVQMYEKGL VRAVGVSNYG
201: PQQLVKIHDY LKTRGVPLCS AQVQFSLLSM GKEQLEIKSI CDELGIRLIS YSPLGLGMLT GKYSSSKLPT GPRSLLFRQI LPGLEPLLLA LSEIAKKRGK
301: TMPQVAINWC ICKGTVPIPG IKSVRHVEDN LGALGWKLTN DEQLQLEYAA KESPKSMIQN IFQTR
101: GQSERLLGKF IKESQGLKGK QNEVVVATKF AAYPWRLTSG QFVNACRASL DRLQIDQLGI GQLHWSTASY APLQELVLWD GLVQMYEKGL VRAVGVSNYG
201: PQQLVKIHDY LKTRGVPLCS AQVQFSLLSM GKEQLEIKSI CDELGIRLIS YSPLGLGMLT GKYSSSKLPT GPRSLLFRQI LPGLEPLLLA LSEIAKKRGK
301: TMPQVAINWC ICKGTVPIPG IKSVRHVEDN LGALGWKLTN DEQLQLEYAA KESPKSMIQN IFQTR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.