CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
peroxisome 1
cytosol 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14368	Canola	plastid	96.41	96.68
AT5G53580.1	Thale cress	plastid	91.71	90.96
VIT_16s0098g01180.t01	Wine grape	cytosol, nucleus, peroxisome	71.55	79.94
KRH53587	Soybean	plastid	76.8	77.01
PGSC0003DMT400047623	Potato	plastid	73.76	72.16
Solyc03g082560.2.1	Tomato	nucleus	73.48	71.89
Os10t0517400-01	Rice	plasma membrane	72.65	70.13
TraesCS1D01G184400.1	Wheat	plastid	72.38	69.87
TraesCS1B01G199700.1	Wheat	plastid	72.1	69.6
TraesCS1A01G180800.1	Wheat	plastid	72.1	69.6
EER93936	Sorghum	plastid	70.72	69.0
GSMUA_Achr3P18270_001	Banana	plastid	71.55	68.52
HORVU1Hr1G047820.1	Barley	cytosol, peroxisome, plastid	71.82	61.47
CDX86514	Canola	plastid	37.57	36.07
CDY15588	Canola	plastid	37.57	36.07
CDY34675	Canola	cytosol	16.02	27.49
CDY70614	Canola	cytosol	24.59	26.41
CDY15518	Canola	mitochondrion	21.82	24.09
CDY18250	Canola	cytosol	21.55	23.78
CDX89797	Canola	cytosol, mitochondrion, plastid	21.55	23.78
CDX86614	Canola	mitochondrion	21.55	23.78
CDY34139	Canola	cytosol	15.75	22.53
CDY18231	Canola	cytosol	20.99	18.4
CDX89825	Canola	plastid	21.82	17.25
CDY18564	Canola	extracellular, plasma membrane	10.77	10.74

Protein Annotations

Gene3D:3.20.20.100	MapMan:35.1	GO:A0A078G111	UniProt:A0A078G111	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase
EnsemblPlants:CDY20245	ProteinID:CDY20245	ProteinID:CDY20245.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00010193001	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PRINTS:PR00069	ScanProsite:PS00062	PANTHER:PTHR43625	PANTHER:PTHR43625:SF5
SUPFAM:SSF51430	UniParc:UPI0004EF0C23	SEG:seg	:	:	:

Description

BnaC09g29940DBnaC09g29940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G111]

Coordinates

chrLK032104:+:635445..637185

Molecular Weight (calculated)

40197.8 Da

IEP (calculated)

8.930

GRAVY (calculated)

-0.084

Length

362 amino acids

Sequence
(BLAST)

001: MAFTLSTTKT LTTNINCSNT TSFKPLKLPL FWPWEKVKMG PLSVSPMGFG TWAWGNQLLW GYQTSMDIQL QQAFELALEN GINLFDTADS YGTGRLNGQS
101: ERLLGQFIKQ SQALKGKQSE VVIATKFAAY PWRLTSGQFV NACSASLERL QIDQLGIGQL HWSTANYAPL QELALWDGLV AMYEKGLVRA VGVSNYGPQQ
201: LVKIHDYLKT RGVPLCSAQV QFSLLSYGKE QQEIKRVCDE LGIRLISYSP LGLGMLTGKY SSSKLPTGPR SLLFGQILPG LEPLLVALRE IAEIRGKTMP
301: QVAINWCICK GTVPIPGIKS VRHVEDNLGA MGWILTNDEQ LQLEYAAQES PRSMIQNIFQ TR

Best Arabidopsis Sequence Match ( AT5G53580.1 )
(BLAST)

001: MALTLSTTKT FTNINCSNNT SNITTFKPLK LPLFWPWQKV KMGPLSVSPM GFGTWAWGNQ LLWGYQTSMD DQLQQAFELA LENGINLFDT ADSYGTGRLN
101: GQSERLLGKF IKESQGLKGK QNEVVVATKF AAYPWRLTSG QFVNACRASL DRLQIDQLGI GQLHWSTASY APLQELVLWD GLVQMYEKGL VRAVGVSNYG
201: PQQLVKIHDY LKTRGVPLCS AQVQFSLLSM GKEQLEIKSI CDELGIRLIS YSPLGLGMLT GKYSSSKLPT GPRSLLFRQI LPGLEPLLLA LSEIAKKRGK
301: TMPQVAINWC ICKGTVPIPG IKSVRHVEDN LGALGWKLTN DEQLQLEYAA KESPKSMIQN IFQTR

Arabidopsis Description

PLR1Pyridoxal reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q56Y42]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.