Factsheet for GSMUA_Achr3P18270_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0098g01180.t01	Wine grape	cytosol, nucleus, peroxisome	70.37	82.1
KRH53587	Soybean	plastid	70.9	74.24
Os10t0517400-01	Rice	plasma membrane	73.02	73.6
EER93936	Sorghum	plastid	72.22	73.58
Solyc03g082560.2.1	Tomato	nucleus	71.96	73.51
PGSC0003DMT400047623	Potato	plastid	71.69	73.24
TraesCS1D01G184400.1	Wheat	plastid	72.22	72.8
TraesCS1B01G199700.1	Wheat	plastid	71.96	72.53
TraesCS1A01G180800.1	Wheat	plastid	71.43	72.0
Bra003045.1-P	Field mustard	plastid	68.52	71.75
CDY14368	Canola	plastid	68.52	71.75
CDY20245	Canola	plastid	68.52	71.55
AT5G53580.1	Thale cress	plastid	68.78	71.23
HORVU1Hr1G047820.1	Barley	cytosol, peroxisome, plastid	71.43	63.83
GSMUA_Achr4P31780_001	Banana	mitochondrion	36.77	37.47
GSMUA_Achr5P16000_001	Banana	cytosol, nucleus, plastid	11.11	27.81
GSMUA_Achr9P10640_001	Banana	cytosol	25.4	27.51
GSMUA_Achr5P16010_001	Banana	cytosol	8.47	27.35
GSMUA_Achr8P26850_001	Banana	mitochondrion	24.07	26.0
GSMUA_Achr5P03020_001	Banana	cytosol	5.29	23.26
GSMUA_Achr2P02520_001	Banana	extracellular, plasma membrane	20.9	22.13
GSMUA_Achr9P23530_001	Banana	mitochondrion	17.72	22.11
GSMUA_Achr3P27400_001	Banana	mitochondrion	17.72	22.11
GSMUA_Achr5P16020_001	Banana	cytosol	23.02	22.03
GSMUA_Achr8P20540_001	Banana	cytosol	13.23	21.93
GSMUA_Achr4P04780_001	Banana	plastid	20.9	18.68

Protein Annotations

Gene3D:3.20.20.100	MapMan:35.1	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009443	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0016491	GO:GO:0042821	GO:GO:0050236	GO:GO:0055114	GO:GO:0070402
EnsemblPlantsGene:GSMUA_Achr3G18270_001	EnsemblPlants:GSMUA_Achr3P18270_001	EnsemblPlants:GSMUA_Achr3T18270_001	InterPro:IPR036812	UniProt:M0SFP3	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PRINTS:PR00069	ScanProsite:PS00062	PANTHER:PTHR43625	PANTHER:PTHR43625:SF5
SUPFAM:SSF51430	UniParc:UPI000295FF1E	SEG:seg	:	:	:

Description

Putative Uncharacterized oxidoreductase At1g06690, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr3G18270_001]

Coordinates

chr3:-:19760031..19765463

Molecular Weight (calculated)

41846.0 Da

IEP (calculated)

9.716

GRAVY (calculated)

-0.142

Length

378 amino acids

Sequence
(BLAST)

001: MALRWPAAAT GAHFGCRASK KGTMRPPPPS PSPAAKLFKL PPRIGPLFWP WEKVKVGPLV VSPMGFGTWA WGNQLLWGYK EEMDALLQET FDLALRNGIT
101: LFDTADSYGT GRLNGQSERL LGKFIREFQG RNIGDNIVIA TKFAAYPWRL TPGQFVKACK SSLERLQLDQ IGIGQLHWST ANYAPLQEQA LWDGLVAMYE
201: EGLVRAVGVS NYGPKQLIKI HDYLESRGVP LCSAQVQFSL LSMSDAQMEL KEVCDSLGIR LIAYSPLGLG MLTGKYTTSS LPRGPRALLF RQVLPGLDPL
301: LNSLKDISEM RQKTMSQVAI NWCICKGTIP IPGVKSVKQA EENLGSLGWR LSSDEIFELE SAAKSSPKKM IQNIFQTR

Best Arabidopsis Sequence Match ( AT5G53580.1 )
(BLAST)

001: MALTLSTTKT FTNINCSNNT SNITTFKPLK LPLFWPWQKV KMGPLSVSPM GFGTWAWGNQ LLWGYQTSMD DQLQQAFELA LENGINLFDT ADSYGTGRLN
101: GQSERLLGKF IKESQGLKGK QNEVVVATKF AAYPWRLTSG QFVNACRASL DRLQIDQLGI GQLHWSTASY APLQELVLWD GLVQMYEKGL VRAVGVSNYG
201: PQQLVKIHDY LKTRGVPLCS AQVQFSLLSM GKEQLEIKSI CDELGIRLIS YSPLGLGMLT GKYSSSKLPT GPRSLLFRQI LPGLEPLLLA LSEIAKKRGK
301: TMPQVAINWC ICKGTVPIPG IKSVRHVEDN LGALGWKLTN DEQLQLEYAA KESPKSMIQN IFQTR

Arabidopsis Description

PLR1Pyridoxal reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q56Y42]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.