Factsheet for TraesCS1D01G184400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G199700.1	Wheat	plastid	98.67	98.67
TraesCS1A01G180800.1	Wheat	plastid	97.87	97.87
Os10t0517400-01	Rice	plasma membrane	89.6	89.6
EER93936	Sorghum	plastid	87.73	88.68
HORVU1Hr1G047820.1	Barley	cytosol, peroxisome, plastid	95.73	84.87
VIT_16s0098g01180.t01	Wine grape	cytosol, nucleus, peroxisome	66.4	76.85
AT5G53580.1	Thale cress	plastid	71.2	73.15
Bra003045.1-P	Field mustard	plastid	70.13	72.85
PGSC0003DMT400047623	Potato	plastid	71.47	72.43
Solyc03g082560.2.1	Tomato	nucleus	71.47	72.43
CDY20245	Canola	plastid	69.87	72.38
CDY14368	Canola	plastid	69.6	72.3
KRH53587	Soybean	plastid	69.6	72.3
GSMUA_Achr3P18270_001	Banana	plastid	72.8	72.22
TraesCS2D01G254700.1	Wheat	cytosol, mitochondrion	38.13	38.24
TraesCS2D01G254500.1	Wheat	mitochondrion, plastid	37.6	38.01
TraesCS6D01G127900.1	Wheat	mitochondrion	26.67	27.78
TraesCS2D01G336700.1	Wheat	cytosol	24.8	26.8
TraesCS2D01G336900.1	Wheat	cytosol, mitochondrion	24.53	26.74
TraesCS5D01G336900.1	Wheat	golgi, plastid	24.53	26.29
TraesCS2D01G273400.1	Wheat	cytosol	24.27	26.22
TraesCS2D01G273600.1	Wheat	cytosol, mitochondrion, plastid	12.53	25.82
TraesCS5D01G522300.1	Wheat	cytosol	24.0	25.71
TraesCS2D01G336800.1	Wheat	cytosol, mitochondrion	24.8	25.69
TraesCS7D01G197100.1	Wheat	cytosol	23.2	25.51
TraesCS6D01G378400.1	Wheat	plastid	21.87	25.0
TraesCS3D01G230600.1	Wheat	cytosol, golgi, unclear	21.87	24.05
TraesCS7D01G186400.1	Wheat	cytosol	22.13	23.71
TraesCS3D01G080800.1	Wheat	cytosol	20.8	21.73
TraesCS4D01G078200.1	Wheat	plastid	22.67	20.99
TraesCS4D01G078600.1	Wheat	plastid	22.93	20.77

Protein Annotations

EnsemblPlants:TraesCS1D01G184400.1	EnsemblPlantsGene:TraesCS1D01G184400	Gene3D:3.20.20.100	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase	InterPro:IPR036812
InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PANTHER:PTHR43625	PANTHER:PTHR43625:SF5	PFAM:PF00248	PRINTS:PR00069
ScanProsite:PS00062	SEG:seg	SUPFAM:SSF51430	TIGR:cd06660	MapMan:35.1	:

Description

No Description!

Coordinates

chr1D:+:254783868..254790423

Molecular Weight (calculated)

40757.5 Da

IEP (calculated)

8.874

GRAVY (calculated)

-0.070

Length

375 amino acids

Sequence
(BLAST)

001: MALSAAKAAP ATPFSSQPHG GGVLLRRPPS PPPPAAALRL GPLFWPWQKV KVGPLSVSPM GFGTWAWGNQ LLWGYQESMD SELQECFNLA LKNGINLFDT
101: ADSYGTGKLN GQSERLLGKF IRECQGPIKS PDDVIIATKF AAYPWRLTSG QFVNACKSSL ERLQIDRLGI GQLHWSTANY APLQERALWD GLVEMYDKGL
201: VRAVGVSNYG PKQLLKIHSY LASRGVPLSS AQVQFSLLSM GDEQMELKTV CDSLGVRLIA YSPLGLGMLT GKYDASNLPN GPRSVLFRQI LPGLESLLSC
301: LSGIADRKGK TMSQVAINWC ICKGAIPIPG VKTVRHVEDN LGALGWRLSP DEISELEAAA MECPKKMVQN IFQTA

Best Arabidopsis Sequence Match ( AT5G53580.1 )
(BLAST)

001: MALTLSTTKT FTNINCSNNT SNITTFKPLK LPLFWPWQKV KMGPLSVSPM GFGTWAWGNQ LLWGYQTSMD DQLQQAFELA LENGINLFDT ADSYGTGRLN
101: GQSERLLGKF IKESQGLKGK QNEVVVATKF AAYPWRLTSG QFVNACRASL DRLQIDQLGI GQLHWSTASY APLQELVLWD GLVQMYEKGL VRAVGVSNYG
201: PQQLVKIHDY LKTRGVPLCS AQVQFSLLSM GKEQLEIKSI CDELGIRLIS YSPLGLGMLT GKYSSSKLPT GPRSLLFRQI LPGLEPLLLA LSEIAKKRGK
301: TMPQVAINWC ICKGTVPIPG IKSVRHVEDN LGALGWKLTN DEQLQLEYAA KESPKSMIQN IFQTR

Arabidopsis Description

PLR1Pyridoxal reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q56Y42]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.