Factsheet for PGSC0003DMT400047623

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g082560.2.1	Tomato	nucleus	97.03	97.03
VIT_16s0098g01180.t01	Wine grape	cytosol, nucleus, peroxisome	76.49	87.35
KRH53587	Soybean	plastid	76.76	78.67
Bra003045.1-P	Field mustard	plastid	72.97	74.79
CDY14368	Canola	plastid	72.97	74.79
AT5G53580.1	Thale cress	plastid	73.24	74.25
CDY20245	Canola	plastid	72.16	73.76
GSMUA_Achr3P18270_001	Banana	plastid	73.24	71.69
TraesCS1D01G184400.1	Wheat	plastid	72.43	71.47
TraesCS1B01G199700.1	Wheat	plastid	72.16	71.2
EER93936	Sorghum	plastid	70.81	70.62
TraesCS1A01G180800.1	Wheat	plastid	71.35	70.4
Os10t0517400-01	Rice	plasma membrane	71.08	70.13
HORVU1Hr1G047820.1	Barley	cytosol, peroxisome, plastid	71.08	62.17
PGSC0003DMT400041157	Potato	plastid	36.49	36.78
PGSC0003DMT400016484	Potato	cytosol	23.24	24.71
PGSC0003DMT400016819	Potato	cytosol	12.97	24.24
PGSC0003DMT400043456	Potato	cytosol, mitochondrion	21.62	24.24
PGSC0003DMT400043415	Potato	endoplasmic reticulum, extracellular	22.7	23.4
PGSC0003DMT400006010	Potato	cytosol	21.62	23.19
PGSC0003DMT400016815	Potato	extracellular	7.57	22.58
PGSC0003DMT400016488	Potato	mitochondrion	14.59	22.41
PGSC0003DMT400042008	Potato	cytosol, plastid	20.27	18.75
PGSC0003DMT400042838	Potato	cytosol	20.54	16.93
PGSC0003DMT400016479	Potato	cytosol	2.7	16.13

Protein Annotations

EntrezGene:102586055	Gene3D:3.20.20.100	MapMan:35.1	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812
UniProt:M1BL45	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	EnsemblPlantsGene:PGSC0003DMG400018510	PGSC:PGSC0003DMG400018510
EnsemblPlants:PGSC0003DMT400047623	PRINTS:PR00069	ScanProsite:PS00062	PANTHER:PTHR43625	PANTHER:PTHR43625:SF5	SUPFAM:SSF51430
UniParc:UPI0002960C3E	RefSeq:XP_006350491.1	SEG:seg	:	:	:

Description

Aldo/keto reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400018510]

Coordinates

chr3:+:47823311..47827789

Molecular Weight (calculated)

41107.0 Da

IEP (calculated)

9.873

GRAVY (calculated)

-0.171

Length

370 amino acids

Sequence
(BLAST)

001: MALCLSASKS IAFNIRCSNS TSDSLPSSSV FKSLKIPRFW PWQKVKMGPL TVSPMGFGTW AWGNQLLWGY QDSMDSELQQ TFNLAVENGI NLFDTADSYG
101: TGKLNGQSEK LLGKFIRQFP GDKQVKNDIV IATKFAAYPW RLTPGQFVNA CKSSLDRMQI EQIGIGQLHW STANYAPLQE RALWNGLVAM YDKGLVRAVG
201: VSNYGPKQLL KIHKYLDDRG VPLRSAQVQF SLLSMGSDQM EIKNICDSLG IRVIAYSPLG LGMLTGKYTP SNLPPGPRGL LFRQILPGLE PLLTSLREIA
301: QRRRKTIPQV AINWCICKGT IPIPGVKSVK QTEENLGALG WQLSSDELLQ LEYAALDSPQ KMIQNVFQTK

Best Arabidopsis Sequence Match ( AT5G53580.1 )
(BLAST)

001: MALTLSTTKT FTNINCSNNT SNITTFKPLK LPLFWPWQKV KMGPLSVSPM GFGTWAWGNQ LLWGYQTSMD DQLQQAFELA LENGINLFDT ADSYGTGRLN
101: GQSERLLGKF IKESQGLKGK QNEVVVATKF AAYPWRLTSG QFVNACRASL DRLQIDQLGI GQLHWSTASY APLQELVLWD GLVQMYEKGL VRAVGVSNYG
201: PQQLVKIHDY LKTRGVPLCS AQVQFSLLSM GKEQLEIKSI CDELGIRLIS YSPLGLGMLT GKYSSSKLPT GPRSLLFRQI LPGLEPLLLA LSEIAKKRGK
301: TMPQVAINWC ICKGTVPIPG IKSVRHVEDN LGALGWKLTN DEQLQLEYAA KESPKSMIQN IFQTR

Arabidopsis Description

PLR1Pyridoxal reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q56Y42]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.