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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • vacuole 2
  • extracellular 2
  • peroxisome 1
  • plasma membrane 2
  • mitochondrion 1
  • endoplasmic reticulum 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:plastid
EpiLoc:vacuole
MultiLoc:extracellular
Plant-mPloc:peroxisome, plasma membrane, plastid
PProwler:mitochondrion
TargetP:secretory
YLoc:cytosol
mitochondrion: 24351685
msms PMID: 24351685 doi
F Salvato, JF Havelund, M Chen, RS Rao, A Rogowska-Wrzesinska, ON Jensen, DR Gang, JJ Thelen, IM Møller
Department of Biochemistry and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400016479 Potato cytosol 21.58 83.87
Solyc09g082720.2.1 Tomato cytosol, plastid 96.27 67.25
Os04t0338100-01 Rice cytosol, nucleus 26.97 58.04
PGSC0003DMT400016484 Potato cytosol 78.84 54.6
KRH35444 Soybean cytosol 71.78 50.29
KRH35448 Soybean nucleus 71.78 49.71
VIT_05s0020g04130.t01 Wine grape cytosol 70.54 49.28
PGSC0003DMT400016819 Potato cytosol 39.83 48.48
EER91589 Sorghum cytosol 63.9 45.16
Os10t0419100-01 Rice cytosol, plasma membrane 63.49 44.61
OQU87178 Sorghum cytosol 63.49 44.48
TraesCS7B01G101300.1 Wheat cytosol 61.83 44.35
Os01t0618100-01 Rice plasma membrane 63.07 44.19
Zm00001d044212_P001 Maize cytosol, extracellular, mitochondrion 62.24 43.86
TraesCS7D01G197100.1 Wheat cytosol 61.83 43.7
HORVU7Hr1G039930.1 Barley cytosol 61.83 43.7
TraesCS7A01G195600.1 Wheat cytosol 61.41 43.4
TraesCS7B01G090000.1 Wheat cytosol 62.24 43.23
GSMUA_Achr8P26850_001 Banana mitochondrion 62.66 43.14
HORVU3Hr1G054640.2 Barley cytosol 61.0 43.11
TraesCS3D01G230600.1 Wheat cytosol, golgi, unclear 61.0 43.11
TraesCS3B01G252400.1 Wheat cytosol 60.58 42.82
TraesCS3A01G222900.1 Wheat cytosol, golgi, nucleus 60.58 42.82
TraesCS7A01G184900.1 Wheat cytosol 60.17 42.65
TraesCS7B01G089600.1 Wheat cytosol 61.0 42.61
TraesCS7A01G185000.1 Wheat cytosol 60.58 42.2
EES03282 Sorghum cytosol 61.0 42.12
TraesCS7D01G186400.1 Wheat cytosol 61.0 42.0
KXG33406 Sorghum mitochondrion 52.28 39.87
KXG32909 Sorghum plastid 61.41 38.54
HORVU7Hr1G040080.2 Barley cytosol 11.62 38.36
TraesCS7B01G089800.1 Wheat cytosol 50.62 38.12
PGSC0003DMT400006010 Potato cytosol 54.36 37.97
Zm00001d011363_P002 Maize cytosol 46.47 31.46
Zm00001d032921_P001 Maize cytosol 61.83 23.69
PGSC0003DMT400042838 Potato cytosol 35.27 18.93
PGSC0003DMT400043456 Potato cytosol, mitochondrion 24.48 17.88
PGSC0003DMT400043415 Potato endoplasmic reticulum, extracellular 26.56 17.83
PGSC0003DMT400016815 Potato extracellular 9.13 17.74
PGSC0003DMT400042008 Potato cytosol, plastid 26.97 16.25
PGSC0003DMT400041157 Potato plastid 24.07 15.8
PGSC0003DMT400047623 Potato plastid 22.41 14.59
Protein Annotations
EnsemblPlants:PGSC0003DMT400016488EnsemblPlantsGene:PGSC0003DMG400006440Gene3D:3.20.20.100InterPro:IPR036812InterPro:NADP_OxRdtase_domInterPro:NADP_OxRdtase_dom_sf
PANTHER:PTHR43625PANTHER:PTHR43625:SF10PFAM:PF00248PGSC:PGSC0003DMG400006440SUPFAM:SSF51430UniParc:UPI000295FE33
UniProt:M1A7Q6MapMan:50.1.1::::
Description
Aldo/keto reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400006440]
Coordinates
chr9:-:54472917..54474021
Molecular Weight (calculated)
27141.6 Da
IEP (calculated)
4.925
GRAVY (calculated)
-0.222
Length
241 amino acids
Sequence
(BLAST)
001: QVSKLGFGCL GLSGILNTPL SHEAGCSILK ETFNKGITFF DTSDLYGHEG DNEIMIGKAL KQLPREQVQL ATKFGLLLSE GFQFHVKGTP EYVRKCCEES
101: LKRLDVDYID LYYPHRIDTT VPIEETMGEL KKLVEEGKIR YIGLSEASVD TIKRAHAVHP ITAVQLEYSL WTRDIEEDVI PLWTTKIKNL NDNVQSLGVK
201: LTLDDLKEII DSVPISEVCG ERDGAVISKY DYRFANTPLM Q
Best Arabidopsis Sequence Match ( AT1G60680.1 )
(BLAST)
001: MAEACRVRRM KLGSQGLEVS AQGLGCMALS ARYGAPKPET DAIALLHHAI NSGVTFFDTS DMYGPETNEL LLGKALKDGV KEKVELATKF GFFIVEGEIS
101: EVRGDPEYVR AACEASLKRL DIACIDLYYQ HRIDTRVPIE ITMRELKKLV EEGKIKYIGL SEASASTIRR AHAVHPITAV QIEWSLWSRD AEEDIIPICR
201: ELGIGIVAYS PLGRGFLAAG PKLAENLEND DFRKTLPRFQ QENVDHNKIL FEKVSAMAEK KGCTPAQLAL AWVHHQGDDV CPIPGTTKIE NLNQNIRALS
301: VKLTPEEISE LDSLAKPESV KGERYMASMS TFKNSNTPPL SSWKAT
Arabidopsis Description
AGD2Probable aldo-keto reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84M96]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.