CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
mitochondrion 2
cytosol 4
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03282	Sorghum	cytosol	81.4	80.23
Zm00001d011363_P002	Maize	cytosol	79.07	76.4
KXG33406	Sorghum	mitochondrion	67.44	73.42
KXG32909	Sorghum	plastid	79.36	71.09
VIT_14s0030g01960.t01	Wine grape	cytosol	68.31	69.32
VIT_14s0030g01980.t01	Wine grape	cytosol	67.15	67.54
EER91589	Sorghum	cytosol	66.28	66.86
VIT_14s0030g02050.t01	Wine grape	cytosol	66.28	66.47
VIT_14s0030g02020.t01	Wine grape	cytosol	66.57	65.99
Solyc01g097390.2.1	Tomato	plastid	64.53	64.53
VIT_14s0030g01970.t01	Wine grape	cytosol	64.24	63.69
PGSC0003DMT400016488	Potato	mitochondrion	44.48	63.49
VIT_05s0020g04130.t01	Wine grape	cytosol	63.37	63.19
Solyc01g097380.1.1	Tomato	plastid	61.05	63.06
PGSC0003DMT400016484	Potato	cytosol	63.37	62.64
Solyc09g082720.2.1	Tomato	cytosol, plastid	62.21	62.03
VIT_14s0030g01990.t01	Wine grape	cytosol	62.5	61.25
VIT_14s0030g02060.t01	Wine grape	peroxisome	62.21	60.97
Solyc09g082730.2.1	Tomato	cytosol	61.05	60.69
EER97210	Sorghum	cytosol, mitochondrion	57.56	56.73
EER87770	Sorghum	cytosol	56.69	56.36
OQU76240	Sorghum	mitochondrion	58.14	56.34
EER97869	Sorghum	cytosol	56.98	55.52
VIT_14s0030g02010.t01	Wine grape	extracellular, mitochondrion	17.15	53.15
KXG19188	Sorghum	cytosol	56.1	49.61
OQU82702	Sorghum	mitochondrion	13.95	41.38
OQU82703	Sorghum	plastid	18.02	40.26
KXG26676	Sorghum	mitochondrion, plastid	30.23	27.3
EER95858	Sorghum	mitochondrion	29.65	27.06
EES06018	Sorghum	mitochondrion	24.42	25.61
EER93819	Sorghum	plastid	25.87	22.19
EER93936	Sorghum	plastid	23.55	21.83
OQU91377	Sorghum	plastid	25.0	21.23
OQU80724	Sorghum	cytosol, endoplasmic reticulum, peroxisome	25.29	15.03

Protein Annotations

EnsemblPlants:OQU87178	EnsemblPlantsGene:SORBI_3003G222300	EntrezGene:8054390	Gene3D:3.20.20.100	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	PANTHER:PTHR43625	PANTHER:PTHR43625:SF2	PFAM:PF00248	ProteinID:OQU87178	ProteinID:OQU87178.1
RefSeq:XP_002458165.1	SEG:seg	SUPFAM:SSF51430	UniParc:UPI0001A8500A	UniProt:A0A1W0VYH4	MapMan:50.1.1

Description

hypothetical protein

Coordinates

chr3:-:55802540..55805088

Molecular Weight (calculated)

38202.8 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.325

Length

344 amino acids

Sequence
(BLAST)

001: MANQAPPVPR VKLGTQGFEV SKLGFGCMGL TGAYNSPLDD EAGIAVITHA FSRGITFFDT SNVYGPLTNE ILLGKALKQL PREQVQVATK FGILRDESGN
101: RTVCGRPEYV RACCEASLRR LDIDCIDLYY QHRIDTTIPI EETIGELKKL VEEGKVKYIG LSEASPDTIR RAHAVHPITA VQMEWSLWSR DIEPEIVPLC
201: RELGIGIVPY SPLGRGFFGG RGVKEQVSAE SVLHGIPRFA PENLEKNKQI YLRMEELANK HQCSPTQLAL AWVLHQGNDV VPIPGTTKIK NLDSNIDSLK
301: VKLTDEDLKE MGSQIREEDV AGGRQFASFE HATWKYADTP KKQS

Best Arabidopsis Sequence Match ( AT1G60680.1 )
(BLAST)

001: MAEACRVRRM KLGSQGLEVS AQGLGCMALS ARYGAPKPET DAIALLHHAI NSGVTFFDTS DMYGPETNEL LLGKALKDGV KEKVELATKF GFFIVEGEIS
101: EVRGDPEYVR AACEASLKRL DIACIDLYYQ HRIDTRVPIE ITMRELKKLV EEGKIKYIGL SEASASTIRR AHAVHPITAV QIEWSLWSRD AEEDIIPICR
201: ELGIGIVAYS PLGRGFLAAG PKLAENLEND DFRKTLPRFQ QENVDHNKIL FEKVSAMAEK KGCTPAQLAL AWVHHQGDDV CPIPGTTKIE NLNQNIRALS
301: VKLTPEEISE LDSLAKPESV KGERYMASMS TFKNSNTPPL SSWKAT

Arabidopsis Description

AGD2Probable aldo-keto reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84M96]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.