CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018485_P002	Maize	mitochondrion	96.34	96.34
Zm00001d051912_P001	Maize	mitochondrion	95.73	95.44
Os02t0817500-01	Rice	mitochondrion	93.6	93.6
TraesCS6D01G378400.1	Wheat	plastid	92.07	92.07
TraesCS6B01G432900.1	Wheat	mitochondrion	91.16	91.16
HORVU6Hr1G091250.1	Barley	mitochondrion	91.16	91.16
CDY15518	Canola	mitochondrion	86.59	86.59
GSMUA_Achr9P23530_001	Banana	mitochondrion	79.88	86.47
Bra030584.1-P	Field mustard	mitochondrion	86.28	86.28
CDX86614	Canola	mitochondrion	86.28	86.28
AT1G04690.1	Thale cress	cytosol	85.98	85.98
VIT_05s0051g00650.t01	Wine grape	mitochondrion	85.98	85.98
CDY18250	Canola	cytosol	85.67	85.67
GSMUA_Achr3P27400_001	Banana	mitochondrion	78.96	85.48
Bra015342.1-P	Field mustard	cytosol	85.37	85.37
CDX89797	Canola	cytosol, mitochondrion, plastid	85.37	85.37
KRG90245	Soybean	nucleus	85.06	85.06
KRH33472	Soybean	nucleus	84.76	84.76
Solyc12g098150.1.1	Tomato	plastid	84.76	84.24
PGSC0003DMT400043456	Potato	cytosol, mitochondrion	84.45	83.94
TraesCS6A01G392700.1	Wheat	golgi	91.46	79.16
CDY18564	Canola	extracellular, plasma membrane	32.93	29.75
EER93819	Sorghum	plastid	30.79	25.19
EER91589	Sorghum	cytosol	25.91	24.93
OQU76240	Sorghum	mitochondrion	26.52	24.51
OQU91377	Sorghum	plastid	30.18	24.44
OQU87178	Sorghum	cytosol	25.61	24.42
EER97869	Sorghum	cytosol	25.61	23.8
EES03282	Sorghum	cytosol	25.3	23.78
EER97210	Sorghum	cytosol, mitochondrion	25.0	23.5
EER87770	Sorghum	cytosol	24.7	23.41
OQU82702	Sorghum	mitochondrion	8.23	23.28
KXG33406	Sorghum	mitochondrion	21.95	22.78
KXG32909	Sorghum	plastid	25.61	21.88
EER93936	Sorghum	plastid	24.7	21.83
EER95858	Sorghum	mitochondrion	24.7	21.49
KXG19188	Sorghum	cytosol	25.3	21.34
KXG26676	Sorghum	mitochondrion, plastid	24.7	21.26
OQU82703	Sorghum	plastid	8.54	18.18
OQU80724	Sorghum	cytosol, endoplasmic reticulum, peroxisome	31.71	17.96
Bra017398.1-P	Field mustard	extracellular	5.18	12.88

Protein Annotations

Gene3D:3.20.20.100	MapMan:35.1	EntrezGene:8055310	UniProt:C5XVW9	EnsemblPlants:EES06018	ProteinID:EES06018
ProteinID:EES06018.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005249	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005886	GO:GO:0006810	GO:GO:0006813	GO:GO:0008150
GO:GO:0009506	GO:GO:0009987	GO:GO:0016020	GO:GO:0071805	InterPro:IPR036812	InterPro:K_chnl_volt-dep_bsu_KCNAB
InterPro:K_chnl_volt-dep_bsu_KCNAB-rel	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PRINTS:PR01577	PANTHER:PTHR43150
EnsemblPlantsGene:SORBI_3004G345500	SUPFAM:SSF51430	unigene:Sbi.3361	TIGRFAMs:TIGR01293	UniParc:UPI0001A85C45	RefSeq:XP_002453042.1

Description

hypothetical protein

Coordinates

chr4:+:67546048..67550892

Molecular Weight (calculated)

36463.3 Da

IEP (calculated)

6.790

GRAVY (calculated)

-0.275

Length

328 amino acids

Sequence
(BLAST)

001: MQYKNLGRSG LRVSQLSYGS WVTFGNQLDV KEAKALLQAC RDAGVNFFDN AEVYANGRAE EIMGQAIRDL GWRRSDVVIS TKLFWGGPGP NDKGLSRKHI
101: VEGLRGSLRR LDMDYVDVVY CHRPDASTPV EETVRAMNWV IDQGWAFYWG TSEWSAQQIT EAWAVANRLD LVGPIVEQPE YNLFSRHKVE SEFLPLYSTY
201: GIGLTTWSPL ASGVLTGKYG KGNVPADSRF ALDNYKNLAN RSLVDDTLRK VNGLKPIADE LGVTLAQLSI AWCASNPNVS SVITGATKES QIVENMKALD
301: VIPLLTPEVL DRIEAVVQSK PKRADSYR

Best Arabidopsis Sequence Match ( AT1G04690.1 )
(BLAST)

001: MQYKNLGKSG LKVSTLSFGA WVTFGNQLDV KEAKSILQCC RDHGVNFFDN AEVYANGRAE EIMGQAIREL GWRRSDIVIS TKIFWGGPGP NDKGLSRKHI
101: VEGTKASLKR LDMDYVDVLY CHRPDASTPI EETVRAMNYV IDKGWAFYWG TSEWSAQQIT EAWGAADRLD LVGPIVEQPE YNMFARHKVE TEFLPLYTNH
201: GIGLTTWSPL ASGVLTGKYN KGAIPSDSRF ALENYKNLAN RSLVDDVLRK VSGLKPIADE LGVTLAQLAI AWCASNPNVS SVITGATRES QIQENMKAVD
301: VIPLLTPIVL DKIEQVIQSK PKRPESYR

Arabidopsis Description

KAB1Probable voltage-gated potassium channel subunit beta [Source:UniProtKB/Swiss-Prot;Acc:O23016]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.