Factsheet for HORVU6Hr1G091250.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
plasma membrane 1
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G378400.1	Wheat	plastid	98.48	98.48
TraesCS6B01G432900.1	Wheat	mitochondrion	98.17	98.17
Zm00001d018485_P002	Maize	mitochondrion	92.07	92.07
Os02t0817500-01	Rice	mitochondrion	91.46	91.46
EES06018	Sorghum	mitochondrion	91.16	91.16
Zm00001d051912_P001	Maize	mitochondrion	90.85	90.58
Bra030584.1-P	Field mustard	mitochondrion	85.98	85.98
CDX86614	Canola	mitochondrion	85.98	85.98
VIT_05s0051g00650.t01	Wine grape	mitochondrion	85.98	85.98
CDY15518	Canola	mitochondrion	85.67	85.67
TraesCS6A01G392700.1	Wheat	golgi	98.48	85.22
AT1G04690.1	Thale cress	cytosol	85.06	85.06
GSMUA_Achr3P27400_001	Banana	mitochondrion	78.35	84.82
CDY18250	Canola	cytosol	84.76	84.76
KRH33472	Soybean	nucleus	84.76	84.76
KRG90245	Soybean	nucleus	84.76	84.76
Bra015342.1-P	Field mustard	cytosol	84.45	84.45
CDX89797	Canola	cytosol, mitochondrion, plastid	84.45	84.45
Solyc12g098150.1.1	Tomato	plastid	84.45	83.94
GSMUA_Achr9P23530_001	Banana	mitochondrion	77.44	83.83
PGSC0003DMT400043456	Potato	cytosol, mitochondrion	84.15	83.64
CDY18564	Canola	extracellular, plasma membrane	32.32	29.2
HORVU7Hr1G040080.2	Barley	cytosol	5.79	26.03
HORVU3Hr1G014470.2	Barley	cytosol	28.35	25.91
HORVU7Hr1G039930.1	Barley	cytosol	26.52	25.51
HORVU3Hr1G014430.1	Barley	cytosol	25.61	25.0
HORVU3Hr1G054640.2	Barley	cytosol	25.0	24.05
HORVU2Hr1G082740.6	Barley	cytosol, plastid	13.11	23.89
HORVU2Hr1G066920.7	Barley	cytosol	24.7	23.21
HORVU2Hr1G060710.1	Barley	mitochondrion, plastid	25.3	22.37
HORVU2Hr1G060730.2	Barley	cytosol, mitochondrion	25.3	21.96
HORVU4Hr1G013600.1	Barley	mitochondrion	12.8	20.9
HORVU4Hr1G013530.5	Barley	mitochondrion	30.49	20.62
HORVU6Hr1G026790.4	Barley	plastid	17.68	20.57
HORVU1Hr1G047820.1	Barley	cytosol, peroxisome, plastid	25.3	19.62
HORVU6Hr1G026770.1	Barley	extracellular, mitochondrion, plastid	7.01	19.17
HORVU2Hr1G082700.1	Barley	extracellular	14.33	17.67
Bra017398.1-P	Field mustard	extracellular	4.57	11.36

Protein Annotations

Gene3D:3.20.20.100	MapMan:35.1	EMBL:AK355956	UniProt:F2CWF3	GO:GO:0003674	GO:GO:0005215
GO:GO:0005249	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005886
GO:GO:0006810	GO:GO:0006813	GO:GO:0008150	GO:GO:0009506	GO:GO:0009987	GO:GO:0016020
GO:GO:0071805	EnsemblPlantsGene:HORVU6Hr1G091250	EnsemblPlants:HORVU6Hr1G091250.1	InterPro:IPR036812	InterPro:K_chnl_volt-dep_bsu_KCNAB	InterPro:K_chnl_volt-dep_bsu_KCNAB-rel
InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PRINTS:PR01577	PANTHER:PTHR43150	SUPFAM:SSF51430
TIGRFAMs:TIGR01293	UniParc:UPI0002004C99	SEG:seg	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CWF3]

Coordinates

chrchr6H:+:575064377..575072709

Molecular Weight (calculated)

36490.5 Da

IEP (calculated)

6.802

GRAVY (calculated)

-0.267

Length

328 amino acids

Sequence
(BLAST)

001: MQYNNLGRSG LRVSQLSYGA WVTFGNQLDV KEAKSLLQAC RDAGVNFFDN AEVYANGRAE EIMGQAIRDL GWRRADVVIS TKLFWGGQGP NDKGLSRKHI
101: VEGLKASLKR LDMEYVDVVY AHRPDATTPI EETVRAMNWV IDQGWAFYWG TSEWSAQQIT EAWGVANRLD LVGPIVEQPE YNLFSRHKVE SEFVPLYSTY
201: GIGLTTWSPL ASGVLTGKYS KGNIPPESRF ALDNYKNLAN RSLVDDTLRK VNGLKPIASE LGVSMAQLGI AWCASNPNVS SVITGATKES QIVENMKALE
301: VVPLLTPEVL EKIEAVIQSK PKRLESYR

Best Arabidopsis Sequence Match ( AT1G04690.1 )
(BLAST)

001: MQYKNLGKSG LKVSTLSFGA WVTFGNQLDV KEAKSILQCC RDHGVNFFDN AEVYANGRAE EIMGQAIREL GWRRSDIVIS TKIFWGGPGP NDKGLSRKHI
101: VEGTKASLKR LDMDYVDVLY CHRPDASTPI EETVRAMNYV IDKGWAFYWG TSEWSAQQIT EAWGAADRLD LVGPIVEQPE YNMFARHKVE TEFLPLYTNH
201: GIGLTTWSPL ASGVLTGKYN KGAIPSDSRF ALENYKNLAN RSLVDDVLRK VSGLKPIADE LGVTLAQLAI AWCASNPNVS SVITGATRES QIQENMKAVD
301: VIPLLTPIVL DKIEQVIQSK PKRPESYR

Arabidopsis Description

KAB1Probable voltage-gated potassium channel subunit beta [Source:UniProtKB/Swiss-Prot;Acc:O23016]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.