Factsheet for Zm00001d051912_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

extracellular: 20408568
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018485_P002	Maize	mitochondrion	96.96	97.26
EES06018	Sorghum	mitochondrion	95.44	95.73
Os02t0817500-01	Rice	mitochondrion	93.31	93.6
TraesCS6D01G378400.1	Wheat	plastid	91.49	91.77
TraesCS6B01G432900.1	Wheat	mitochondrion	91.19	91.46
HORVU6Hr1G091250.1	Barley	mitochondrion	90.58	90.85
KRG90245	Soybean	nucleus	85.11	85.37
CDY15518	Canola	mitochondrion	84.8	85.06
KRH33472	Soybean	nucleus	84.8	85.06
CDX86614	Canola	mitochondrion	84.5	84.76
Bra030584.1-P	Field mustard	mitochondrion	84.5	84.76
GSMUA_Achr3P27400_001	Banana	mitochondrion	77.81	84.49
GSMUA_Achr9P23530_001	Banana	mitochondrion	77.81	84.49
VIT_05s0051g00650.t01	Wine grape	mitochondrion	84.19	84.45
AT1G04690.1	Thale cress	cytosol	84.19	84.45
CDY18250	Canola	cytosol	83.89	84.15
CDX89797	Canola	cytosol, mitochondrion, plastid	83.59	83.84
Bra015342.1-P	Field mustard	cytosol	83.59	83.84
Solyc12g098150.1.1	Tomato	plastid	83.28	83.03
PGSC0003DMT400043456	Potato	cytosol, mitochondrion	82.98	82.73
TraesCS6A01G392700.1	Wheat	golgi	91.19	79.16
Zm00001d031970_P001	Maize	cytosol	20.36	30.04
Zm00001d043967_P001	Maize	extracellular	10.64	29.17
CDY18564	Canola	extracellular, plasma membrane	31.61	28.65
Zm00001d031666_P002	Maize	extracellular	25.84	24.57
Zm00001d044212_P001	Maize	cytosol, extracellular, mitochondrion	24.62	23.68
Zm00001d003086_P001	Maize	plastid	26.14	22.99
Zm00001d006365_P001	Maize	mitochondrion	25.84	20.88
Zm00001d033338_P002	Maize	plastid	29.79	20.81
Zm00001d011363_P002	Maize	cytosol	22.49	20.79
Zm00001d036024_P001	Maize	extracellular, mitochondrion	23.71	19.7
Zm00001d007858_P001	Maize	plastid	24.32	19.46
Zm00001d032921_P001	Maize	cytosol	25.84	13.51
Zm00001d043151_P001	Maize	plastid	7.6	12.25
Bra017398.1-P	Field mustard	extracellular	4.86	12.12

Protein Annotations

EntrezGene:100280467	Gene3D:3.20.20.100	MapMan:35.1	ProteinID:AQK55444.1	UniProt:B6SGM5	EMBL:BT067942
EMBL:EU951890	GO:GO:0003674	GO:GO:0005215	GO:GO:0005249	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006813	GO:GO:0008150	GO:GO:0009987
GO:GO:0071805	InterPro:IPR036812	InterPro:K_chnl_volt-dep_bsu_KCNAB	InterPro:K_chnl_volt-dep_bsu_KCNAB-rel	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf
PFAM:PF00248	PRINTS:PR01577	PANTHER:PTHR43150	SUPFAM:SSF51430	TIGRFAMs:TIGR01293	UniParc:UPI000182B495
EnsemblPlantsGene:Zm00001d051912	EnsemblPlants:Zm00001d051912_P001	EnsemblPlants:Zm00001d051912_T001	:	:	:

Description

Probable voltage-gated potassium channel subunit beta

Coordinates

chr4:-:174430425..174434646

Molecular Weight (calculated)

36515.4 Da

IEP (calculated)

7.429

GRAVY (calculated)

-0.230

Length

329 amino acids

Sequence
(BLAST)

001: MQYKNLGRSG LRVSQLSYGA WVTFGNQLDV KEAKVLLQAC RDAGVNFFDN AEVYANGRAE EIMGQAIRDL GWRRSDVVIS TKLFWGGQGP NDKGLSRKHV
101: VEGLRGSLRR LALDYVDVVY CHRPDASTPV EETVRAMNWV IDQGWAFYWG TSEWSAQQIT EAWAVANRLD LVGPIVEQPE YNLFSRHKVE SEFLPLYSTY
201: GIGLTTWSPL ASGVLSGKYG KGDIPADSRF ALDNYKNLAN RSLVDDTLRK VNGLKPIAAE LGVSLAQLSI AWCASNPNVS SVITGATKES QIVENMKALD
301: VIPLLTPEVV DRIEAVVQSK PKRNVESYR

Best Arabidopsis Sequence Match ( AT1G04690.1 )
(BLAST)

001: MQYKNLGKSG LKVSTLSFGA WVTFGNQLDV KEAKSILQCC RDHGVNFFDN AEVYANGRAE EIMGQAIREL GWRRSDIVIS TKIFWGGPGP NDKGLSRKHI
101: VEGTKASLKR LDMDYVDVLY CHRPDASTPI EETVRAMNYV IDKGWAFYWG TSEWSAQQIT EAWGAADRLD LVGPIVEQPE YNMFARHKVE TEFLPLYTNH
201: GIGLTTWSPL ASGVLTGKYN KGAIPSDSRF ALENYKNLAN RSLVDDVLRK VSGLKPIADE LGVTLAQLAI AWCASNPNVS SVITGATRES QIQENMKAVD
301: VIPLLTPIVL DKIEQVIQSK PKRPESYR

Arabidopsis Description

KAB1Probable voltage-gated potassium channel subunit beta [Source:UniProtKB/Swiss-Prot;Acc:O23016]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.