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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 3
  • cytosol 1
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, nucleus, plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:nucleus
golgi: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G378400.1 Wheat plastid 86.02 99.39
TraesCS6B01G432900.1 Wheat mitochondrion 85.75 99.09
HORVU6Hr1G091250.1 Barley mitochondrion 85.22 98.48
Zm00001d018485_P002 Maize mitochondrion 79.95 92.38
Os02t0817500-01 Rice mitochondrion 79.42 91.77
EES06018 Sorghum mitochondrion 79.16 91.46
Zm00001d051912_P001 Maize mitochondrion 79.16 91.19
VIT_05s0051g00650.t01 Wine grape mitochondrion 74.41 85.98
CDX86614 Canola mitochondrion 73.88 85.37
Bra030584.1-P Field mustard mitochondrion 73.88 85.37
CDY15518 Canola mitochondrion 73.61 85.06
KRG90245 Soybean nucleus 73.35 84.76
GSMUA_Achr3P27400_001 Banana mitochondrion 67.55 84.49
KRH33472 Soybean nucleus 73.09 84.45
AT1G04690.1 Thale cress cytosol 73.09 84.45
CDY18250 Canola cytosol 72.82 84.15
Bra015342.1-P Field mustard cytosol 72.56 83.84
CDX89797 Canola cytosol, mitochondrion, plastid 72.56 83.84
Solyc12g098150.1.1 Tomato plastid 72.82 83.64
GSMUA_Achr9P23530_001 Banana mitochondrion 66.75 83.5
PGSC0003DMT400043456 Potato cytosol, mitochondrion 72.56 83.33
CDY18564 Canola extracellular, plasma membrane 28.23 29.48
TraesCS3A01G080900.1 Wheat cytosol 25.86 27.3
TraesCS7A01G195600.1 Wheat cytosol 23.48 26.1
TraesCS7A01G184900.1 Wheat cytosol 22.96 25.59
TraesCS4A01G235500.1 Wheat plastid 26.65 24.94
TraesCS3A01G222900.1 Wheat cytosol, golgi, nucleus 22.43 24.93
TraesCS7A01G185000.1 Wheat cytosol 22.43 24.57
TraesCS4A01G235300.1 Wheat plastid 25.59 24.25
TraesCS4A01G349500.1 Wheat cytosol 12.66 24.0
TraesCS2A01G274700.1 Wheat cytosol, mitochondrion, peroxisome 21.9 23.99
TraesCS2A01G326100.1 Wheat mitochondrion 21.64 23.63
TraesCS2A01G274800.1 Wheat cytosol 21.64 23.63
TraesCS2A01G325800.2 Wheat cytosol, mitochondrion 21.64 23.1
TraesCS1A01G180800.1 Wheat plastid 22.69 22.93
TraesCS2A01G254100.1 Wheat mitochondrion, plastid 22.16 22.64
TraesCS2A01G254200.1 Wheat mitochondrion 22.16 22.46
TraesCS5A01G331200.1 Wheat cytosol 13.46 22.08
Bra017398.1-P Field mustard extracellular 4.22 12.12
Protein Annotations
EnsemblPlants:TraesCS6A01G392700.1EnsemblPlantsGene:TraesCS6A01G392700Gene3D:3.20.20.100GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0009506GO:GO:0016020InterPro:IPR036812InterPro:K_chnl_volt-dep_bsu_KCNAB-relInterPro:NADP_OxRdtase_domInterPro:NADP_OxRdtase_dom_sf
PANTHER:PTHR43150PFAM:PF00248PRINTS:PR01577SEG:segSUPFAM:SSF51430TIGR:cd06660
MapMan:35.1:::::
Description
No Description!
Coordinates
chr6A:-:606986076..606990377
Molecular Weight (calculated)
42318.3 Da
IEP (calculated)
8.960
GRAVY (calculated)
-0.402
Length
379 amino acids
Sequence
(BLAST)
001: MRQPTTELEI PTSTSPTHTF FSPKTHTAPP HTDLTETPPH RRRAAHRRPS KMQYNNLGRS GLRVSQLSYG AWVTFGNQLD VKEAKSLLQA CRDAGVNFFD
101: NAEVYANGRA EEIMGQAIRD LGWRRADVVI STKLFWGGQG PNDKGLSRKH IVEGLKASLK RLNMEYVDVV YCHRPDATTP IEETVRAMNW VIDQGWAFYW
201: GTSEWTAQQI TEAWGVANRL DLVGPIVEQP EYNLFSRHKV ESEFVPLYST YGIGLTTWSP LASGVLTGKY SKGNIPAESR FALDNYKNLA NRSLVDDTLR
301: KVNGLKPIAS ELGVSMAQLG IAWCASNPNV SSVITGATKE SQIVENMKAL EVVPLLTPEV LEKIEAVVQS KPKRLESYR
Best Arabidopsis Sequence Match ( AT1G04690.1 )
(BLAST)
001: MQYKNLGKSG LKVSTLSFGA WVTFGNQLDV KEAKSILQCC RDHGVNFFDN AEVYANGRAE EIMGQAIREL GWRRSDIVIS TKIFWGGPGP NDKGLSRKHI
101: VEGTKASLKR LDMDYVDVLY CHRPDASTPI EETVRAMNYV IDKGWAFYWG TSEWSAQQIT EAWGAADRLD LVGPIVEQPE YNMFARHKVE TEFLPLYTNH
201: GIGLTTWSPL ASGVLTGKYN KGAIPSDSRF ALENYKNLAN RSLVDDVLRK VSGLKPIADE LGVTLAQLAI AWCASNPNVS SVITGATRES QIQENMKAVD
301: VIPLLTPIVL DKIEQVIQSK PKRPESYR
Arabidopsis Description
KAB1Probable voltage-gated potassium channel subunit beta [Source:UniProtKB/Swiss-Prot;Acc:O23016]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.