Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 1
- mitochondrion 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G078600.1 | Wheat | plastid | 93.25 | 90.1 |
| TraesCS4B01G079600.1 | Wheat | mitochondrion | 70.5 | 89.52 |
| HORVU4Hr1G013600.1 | Barley | mitochondrion | 41.0 | 81.59 |
| TraesCS4A01G235500.1 | Wheat | plastid | 79.5 | 78.52 |
| EER93819 | Sorghum | plastid | 76.0 | 75.81 |
| Os03t0611200-01 | Rice | plastid | 76.25 | 75.31 |
| OQU91377 | Sorghum | plastid | 74.75 | 73.83 |
| PGSC0003DMT400042008 | Potato | cytosol, plastid | 66.5 | 66.5 |
| Solyc06g053600.2.1 | Tomato | plastid | 66.0 | 65.84 |
| GSMUA_Achr4P04780_001 | Banana | plastid | 69.25 | 65.48 |
| VIT_05s0049g01130.t01 | Wine grape | plastid | 67.25 | 64.35 |
| Zm00001d033338_P002 | Maize | plastid | 75.5 | 64.12 |
| KRH69116 | Soybean | plastid | 67.25 | 63.9 |
| AT1G04420.1 | Thale cress | plastid | 62.75 | 60.92 |
| CDY18231 | Canola | cytosol | 61.25 | 59.32 |
| Bra015315.1-P | Field mustard | cytosol | 60.5 | 57.62 |
| CDX89825 | Canola | plastid | 61.75 | 53.93 |
| Zm00001d043151_P001 | Maize | plastid | 24.25 | 47.55 |
| TraesCS3A01G080900.1 | Wheat | cytosol | 38.75 | 43.18 |
| TraesCS7A01G184900.1 | Wheat | cytosol | 24.25 | 28.53 |
| TraesCS7A01G195600.1 | Wheat | cytosol | 24.0 | 28.15 |
| TraesCS4A01G349500.1 | Wheat | cytosol | 14.0 | 28.0 |
| TraesCS2A01G326100.1 | Wheat | mitochondrion | 23.0 | 26.51 |
| TraesCS2A01G274700.1 | Wheat | cytosol, mitochondrion, peroxisome | 22.75 | 26.3 |
| TraesCS2A01G274800.1 | Wheat | cytosol | 22.75 | 26.22 |
| TraesCS3A01G222900.1 | Wheat | cytosol, golgi, nucleus | 22.25 | 26.1 |
| TraesCS2A01G325800.2 | Wheat | cytosol, mitochondrion | 23.0 | 25.92 |
| TraesCS7A01G185000.1 | Wheat | cytosol | 22.25 | 25.72 |
| TraesCS6A01G392700.1 | Wheat | golgi | 24.25 | 25.59 |
| TraesCS5A01G331200.1 | Wheat | cytosol | 14.75 | 25.54 |
| TraesCS1A01G180800.1 | Wheat | plastid | 20.75 | 22.13 |
| TraesCS2A01G254200.1 | Wheat | mitochondrion | 19.75 | 21.12 |
| TraesCS2A01G254100.1 | Wheat | mitochondrion, plastid | 19.5 | 21.02 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G235300.1 | EnsemblPlantsGene:TraesCS4A01G235300 | Gene3D:3.20.20.100 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:Aldo/keto_reductase | InterPro:IPR036812 | InterPro:NADP_OxRdtase_dom |
| InterPro:NADP_OxRdtase_dom_sf | PANTHER:PTHR43364 | PANTHER:PTHR43364:SF4 | PFAM:PF00248 | PRINTS:PR00069 | SEG:seg |
| SUPFAM:SSF51430 | TIGR:cd06660 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr4A:-:544058447..544060908
Molecular Weight (calculated)
45453.5 Da
IEP (calculated)
9.475
GRAVY (calculated)
-0.463
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MCKNRGLSVC NNKKFDNGLG ARQSRRWHRR RVRSRVRSAQ EPAKLQYRKL GDSDLLISEI TLGTMTFGEQ STEKESHDMI SYSFDQGINI LDTAEIYPIQ
101: PKEETQGRTD LYVGRWMKSK PRDKVILATK VSGYSDRTFL RDNAEMVRVD APNIKESVEK SLSRLSTDYI DLLHIHWPDR YVALYGEFSY DSTKWRPSVP
201: FEDQLKALQE LIDEGKVRYI GVSNETSYGV MRFVQAAKLH GLPKIVSIQN GYSLLVRCSF EVDLAEVCHP NNCNIGLLAY SPLGSGVLTG KYLDDSCGNS
301: KSFRLNLFPG YMQRYNAPLA KEATKEYLKV AKKHRLTPVQ LALGFVRDRP FTASTIIGAT TMDQLKENIE AFTSAPRPLP PQVLDDIATV FKRYRDPAVL
101: PKEETQGRTD LYVGRWMKSK PRDKVILATK VSGYSDRTFL RDNAEMVRVD APNIKESVEK SLSRLSTDYI DLLHIHWPDR YVALYGEFSY DSTKWRPSVP
201: FEDQLKALQE LIDEGKVRYI GVSNETSYGV MRFVQAAKLH GLPKIVSIQN GYSLLVRCSF EVDLAEVCHP NNCNIGLLAY SPLGSGVLTG KYLDDSCGNS
301: KSFRLNLFPG YMQRYNAPLA KEATKEYLKV AKKHRLTPVQ LALGFVRDRP FTASTIIGAT TMDQLKENIE AFTSAPRPLP PQVLDDIATV FKRYRDPAVL
001: MASSYVTYST VTPVVSSSNI RGVFRLAFTR RRVTLSPNAR RRILRVSAKA STKNAMEYRK LGDSDLNISE VTMGTMTFGE QNTEKESHEM LSYAIEEGIN
101: CIDTAEAYPI PMKKETQGKT DLYISSWLKS QQRDKIVLAT KVCGYSERSA YIRDSGEILR VDAANIKESV EKSLKRLGTD YIDLLQIHWP DRYVPLFGDF
201: YYETSKWRPS VPFAEQLRAF QDLIVEGKVR YIGVSNETSY GVTEFVNTAK LEGLPKIVSI QNGYSLLVRC RYEVDLVEVC HPKNCNVGLL AYSPLGGGSL
301: SGKYLATDQE ATKNARLNLF PGYMERYKGS LAKEATIQYV EVAKKYGLTP VELALGFVRD RPFVTSTIIG ATSVKQLKED IDAFLMTERP FSQEVMADID
401: AVFKRFKDPS FV
101: CIDTAEAYPI PMKKETQGKT DLYISSWLKS QQRDKIVLAT KVCGYSERSA YIRDSGEILR VDAANIKESV EKSLKRLGTD YIDLLQIHWP DRYVPLFGDF
201: YYETSKWRPS VPFAEQLRAF QDLIVEGKVR YIGVSNETSY GVTEFVNTAK LEGLPKIVSI QNGYSLLVRC RYEVDLVEVC HPKNCNVGLL AYSPLGGGSL
301: SGKYLATDQE ATKNARLNLF PGYMERYKGS LAKEATIQYV EVAKKYGLTP VELALGFVRD RPFVTSTIIG ATSVKQLKED IDAFLMTERP FSQEVMADID
401: AVFKRFKDPS FV
Arabidopsis Description
NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ23]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.