Factsheet for TraesCS4B01G079600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G013600.1	Barley	mitochondrion	49.84	78.11
TraesCS4A01G235300.1	Wheat	plastid	89.52	70.5
TraesCS4D01G078600.1	Wheat	plastid	91.75	69.81
TraesCS4B01G079400.1	Wheat	plastid	77.14	60.0
Os03t0611200-01	Rice	plastid	74.92	58.27
EER93819	Sorghum	plastid	72.7	57.11
OQU91377	Sorghum	plastid	72.38	56.3
GSMUA_Achr4P04780_001	Banana	plastid	69.21	51.54
PGSC0003DMT400042008	Potato	cytosol, plastid	65.08	51.25
VIT_05s0049g01130.t01	Wine grape	plastid	67.3	50.72
Solyc06g053600.2.1	Tomato	plastid	64.44	50.62
KRH69116	Soybean	plastid	67.3	50.36
Zm00001d033338_P002	Maize	plastid	73.97	49.47
AT1G04420.1	Thale cress	plastid	62.22	47.57
CDY18231	Canola	cytosol	60.95	46.49
Bra015315.1-P	Field mustard	cytosol	60.32	45.24
Zm00001d043151_P001	Maize	plastid	28.89	44.61
CDX89825	Canola	plastid	61.59	42.36
TraesCS5B01G331500.2	Wheat	cytosol	14.29	32.85
TraesCS3B01G095500.1	Wheat	cytosol	20.95	26.61
TraesCS6B01G432900.1	Wheat	mitochondrion	22.54	21.65
TraesCS2B01G355900.1	Wheat	cytosol, mitochondrion	22.86	20.75
TraesCS5B01G523200.1	Wheat	cytosol	22.54	20.64
TraesCS7B01G101300.1	Wheat	cytosol	21.9	20.54
TraesCS1B01G199700.1	Wheat	plastid	23.49	19.73
TraesCS2B01G292100.1	Wheat	cytosol	21.27	19.31
TraesCS2B01G356100.1	Wheat	cytosol	18.41	19.21
TraesCS7B01G090000.1	Wheat	cytosol	20.63	18.73
TraesCS7B01G089600.1	Wheat	cytosol	20.0	18.26
TraesCS3B01G252400.1	Wheat	cytosol	19.37	17.89
TraesCS7B01G089800.1	Wheat	cytosol	17.46	17.19
TraesCS2B01G268000.1	Wheat	mitochondrion, plastid	19.68	16.71
TraesCS2B01G267900.1	Wheat	mitochondrion	19.37	16.31
TraesCS2B01G356000.1	Wheat	cytosol	9.52	14.71

Protein Annotations

EnsemblPlants:TraesCS4B01G079600.1	EnsemblPlantsGene:TraesCS4B01G079600	Gene3D:3.20.20.100	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Aldo/keto_reductase	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	PANTHER:PTHR43364	PANTHER:PTHR43364:SF4	PFAM:PF00248	PRINTS:PR00069	SEG:seg
SUPFAM:SSF51430	TIGR:cd06660	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr4B:+:77510889..77513761

Molecular Weight (calculated)

36271.1 Da

IEP (calculated)

9.269

GRAVY (calculated)

-0.605

Length

315 amino acids

Sequence
(BLAST)

001: MQQQKIRQQY LRDKWCYARS RSSSQQSQRW HRRRVRSRIR SAQEPAKLQY RKLGDSDLFI SEITLGTMTF GEQSTEKESH DMLSYSFDQG INILDTAEIY
101: PIQPKQETQG RTDLYVGRWM KSKPRDKVIL ATKVSGYSDR TFLRDNAEMV RADAPNIKES VEKSLSRLST DYIDLLHIHW PDRYVALYGE FSYDSTKWKP
201: SVPFEDQLKA LQELIDEGKV RYIGVSNETS YGVMRFVQAA KLHGLPKIVS IQNGYSLLVR CSFEVDLAEV CHPNNCNVGL LAYSPLGSGV LTGKYLDDNS
301: GNSKSFRLNL FPGYM

Best Arabidopsis Sequence Match ( AT1G04420.1 )
(BLAST)

001: MASSYVTYST VTPVVSSSNI RGVFRLAFTR RRVTLSPNAR RRILRVSAKA STKNAMEYRK LGDSDLNISE VTMGTMTFGE QNTEKESHEM LSYAIEEGIN
101: CIDTAEAYPI PMKKETQGKT DLYISSWLKS QQRDKIVLAT KVCGYSERSA YIRDSGEILR VDAANIKESV EKSLKRLGTD YIDLLQIHWP DRYVPLFGDF
201: YYETSKWRPS VPFAEQLRAF QDLIVEGKVR YIGVSNETSY GVTEFVNTAK LEGLPKIVSI QNGYSLLVRC RYEVDLVEVC HPKNCNVGLL AYSPLGGGSL
301: SGKYLATDQE ATKNARLNLF PGYMERYKGS LAKEATIQYV EVAKKYGLTP VELALGFVRD RPFVTSTIIG ATSVKQLKED IDAFLMTERP FSQEVMADID
401: AVFKRFKDPS FV

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ23]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.