CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 8
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91377	Sorghum	plastid	88.28	87.41
Os03t0611200-01	Rice	plastid	84.29	83.46
TraesCS4A01G235500.1	Wheat	plastid	83.54	82.72
TraesCS4D01G078200.1	Wheat	plastid	83.54	82.72
TraesCS4B01G079400.1	Wheat	plastid	82.54	81.73
TraesCS4A01G235300.1	Wheat	plastid	75.81	76.0
TraesCS4D01G078600.1	Wheat	plastid	77.06	74.64
TraesCS4B01G079600.1	Wheat	mitochondrion	57.11	72.7
PGSC0003DMT400042008	Potato	cytosol, plastid	71.07	71.25
Solyc06g053600.2.1	Tomato	plastid	70.57	70.57
VIT_05s0049g01130.t01	Wine grape	plastid	71.57	68.66
HORVU4Hr1G013530.5	Barley	mitochondrion	83.04	68.66
KRH69116	Soybean	plastid	72.07	68.65
GSMUA_Achr4P04780_001	Banana	plastid	71.82	68.09
HORVU4Hr1G013600.1	Barley	mitochondrion	33.17	66.17
AT1G04420.1	Thale cress	plastid	65.84	64.08
CDY18231	Canola	cytosol	62.84	61.02
Bra015315.1-P	Field mustard	cytosol	62.34	59.52
Zm00001d043151_P001	Maize	plastid	28.93	56.86
CDX89825	Canola	plastid	64.59	56.55
EES06018	Sorghum	mitochondrion	25.19	30.79
EER91589	Sorghum	cytosol	23.69	27.86
EER87770	Sorghum	cytosol	23.69	27.46
OQU80724	Sorghum	cytosol, endoplasmic reticulum, peroxisome	38.65	26.77
EER97210	Sorghum	cytosol, mitochondrion	22.69	26.07
OQU87178	Sorghum	cytosol	22.19	25.87
EES03282	Sorghum	cytosol	22.19	25.5
EER97869	Sorghum	cytosol	22.44	25.5
OQU76240	Sorghum	mitochondrion	22.19	25.07
KXG33406	Sorghum	mitochondrion	19.7	25.0
KXG19188	Sorghum	cytosol	22.94	23.65
EER93936	Sorghum	plastid	21.45	23.18
KXG32909	Sorghum	plastid	21.45	22.4
KXG26676	Sorghum	mitochondrion, plastid	19.95	21.0
EER95858	Sorghum	mitochondrion	19.2	20.42
OQU82702	Sorghum	mitochondrion	5.74	19.83
OQU82703	Sorghum	plastid	7.48	19.48

Protein Annotations

Gene3D:3.20.20.100	MapMan:35.1	EntrezGene:8064497	InterPro:Aldo/keto_reductase	UniProt:C5WSB9	EnsemblPlants:EER93819
ProteinID:EER93819	ProteinID:EER93819.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248
PRINTS:PR00069	PANTHER:PTHR43364	PANTHER:PTHR43364:SF4	EnsemblPlantsGene:SORBI_3001G167900	SUPFAM:SSF51430	unigene:Sbi.9141
UniParc:UPI0001A82C54	RefSeq:XP_002466821.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:13971059..13986280

Molecular Weight (calculated)

44957.9 Da

IEP (calculated)

8.077

GRAVY (calculated)

-0.280

Length

401 amino acids

Sequence
(BLAST)

001: MAMPSFAVTS PPSHGGTLSA LHARHPQRLH KRKVHSQVKA VAQTQLQYQK LGDSDLLISE VTLGTMTFGE QNTEKEAHDI IAYSFDQGIN ILDTAEIYPV
101: PVNKETQGRT DLYIGRWMQS KPRDKIILAT KVAGYSERSA FLRDNAEVVR VDAANIKESV EKSLKRLSTD YIDLLQIHWP DRYVALFGEF SYNPTKWRPS
201: IPFEEQLKAF QELIDEGKVR YLGVSNETSY GVMEFVHAAK TQGLPKIVSI QNSYSLLVRC RFEVDLVEVC HPNNCNVGLL AYSPLAGGVL TGKYLDVNTD
301: ISKSRLNLFP GYMARYNASL AKEATLEYVK LAKKHGLTPV QLALGFVRDR PFTASSIIGA TTMDQLKENI DAFTSTPRPL PQEVLDGIED LFKRYKDPAI
401: L

Best Arabidopsis Sequence Match ( AT1G04420.1 )
(BLAST)

001: MASSYVTYST VTPVVSSSNI RGVFRLAFTR RRVTLSPNAR RRILRVSAKA STKNAMEYRK LGDSDLNISE VTMGTMTFGE QNTEKESHEM LSYAIEEGIN
101: CIDTAEAYPI PMKKETQGKT DLYISSWLKS QQRDKIVLAT KVCGYSERSA YIRDSGEILR VDAANIKESV EKSLKRLGTD YIDLLQIHWP DRYVPLFGDF
201: YYETSKWRPS VPFAEQLRAF QDLIVEGKVR YIGVSNETSY GVTEFVNTAK LEGLPKIVSI QNGYSLLVRC RYEVDLVEVC HPKNCNVGLL AYSPLGGGSL
301: SGKYLATDQE ATKNARLNLF PGYMERYKGS LAKEATIQYV EVAKKYGLTP VELALGFVRD RPFVTSTIIG ATSVKQLKED IDAFLMTERP FSQEVMADID
401: AVFKRFKDPS FV

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ23]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.