Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G235500.1 | Wheat | plastid | 81.24 | 97.28 |
| TraesCS4D01G078200.1 | Wheat | plastid | 80.62 | 96.54 |
| TraesCS4B01G079400.1 | Wheat | plastid | 80.0 | 95.8 |
| Os03t0611200-01 | Rice | plastid | 70.93 | 84.94 |
| EER93819 | Sorghum | plastid | 68.66 | 83.04 |
| OQU91377 | Sorghum | plastid | 66.39 | 79.51 |
| PGSC0003DMT400042008 | Potato | cytosol, plastid | 60.62 | 73.5 |
| Solyc06g053600.2.1 | Tomato | plastid | 60.21 | 72.82 |
| HORVU4Hr1G013600.1 | Barley | mitochondrion | 30.1 | 72.64 |
| GSMUA_Achr4P04780_001 | Banana | plastid | 62.68 | 71.87 |
| Zm00001d033338_P002 | Maize | plastid | 68.87 | 70.91 |
| VIT_05s0049g01130.t01 | Wine grape | plastid | 60.41 | 70.1 |
| KRH69116 | Soybean | plastid | 59.59 | 68.65 |
| AT1G04420.1 | Thale cress | plastid | 55.46 | 65.29 |
| CDY18231 | Canola | cytosol | 52.99 | 62.23 |
| Bra015315.1-P | Field mustard | cytosol | 52.99 | 61.19 |
| CDX89825 | Canola | plastid | 54.85 | 58.08 |
| Zm00001d043151_P001 | Maize | plastid | 24.33 | 57.84 |
| HORVU3Hr1G014470.2 | Barley | cytosol | 32.16 | 43.45 |
| HORVU3Hr1G014430.1 | Barley | cytosol | 29.9 | 43.15 |
| HORVU6Hr1G091250.1 | Barley | mitochondrion | 20.62 | 30.49 |
| HORVU2Hr1G082740.6 | Barley | cytosol, plastid | 11.13 | 30.0 |
| HORVU7Hr1G039930.1 | Barley | cytosol | 19.79 | 28.15 |
| HORVU3Hr1G054640.2 | Barley | cytosol | 18.76 | 26.69 |
| HORVU2Hr1G066920.7 | Barley | cytosol | 19.18 | 26.65 |
| HORVU7Hr1G040080.2 | Barley | cytosol | 3.92 | 26.03 |
| HORVU6Hr1G026770.1 | Barley | extracellular, mitochondrion, plastid | 6.39 | 25.83 |
| HORVU6Hr1G026790.4 | Barley | plastid | 13.61 | 23.4 |
| HORVU2Hr1G082700.1 | Barley | extracellular | 12.78 | 23.31 |
| HORVU2Hr1G060730.2 | Barley | cytosol, mitochondrion | 16.91 | 21.69 |
| HORVU2Hr1G060710.1 | Barley | mitochondrion, plastid | 16.29 | 21.29 |
| HORVU1Hr1G047820.1 | Barley | cytosol, peroxisome, plastid | 16.7 | 19.15 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G013530.5 | EnsemblPlantsGene:HORVU4Hr1G013530 | Gene3D:3.20.20.100 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:Aldo/keto_reductase | InterPro:IPR036812 | InterPro:NADP_OxRdtase_dom |
| InterPro:NADP_OxRdtase_dom_sf | PANTHER:PTHR43364 | PANTHER:PTHR43364:SF4 | PFAM:PF00248 | PRINTS:PR00069 | SEG:seg |
| SUPFAM:SSF51430 | UniParc:UPI000B466253 | UniProt:A0A287NA46 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr4H:-:47788040..47793161
Molecular Weight (calculated)
54294.7 Da
IEP (calculated)
10.010
GRAVY (calculated)
-0.515
Length
485 amino acids
Sequence
(BLAST)
(BLAST)
001: SGQGTLFHPP PRILATHTNT VVRRRGTATS STPTRRPPSR GIQATDLAEP PPSSPAVAGR QGQPRNRNFG RRRPRNRNFS MQQMALSAFV ATPSSSYSNG
101: LPGSTARRSQ RWHARRLRSQ VRAQAQDGLQ YKKLGDSDLL VSEITLGTMT FGEQNTEKEA HDMLSYSLDQ GINILDTAEM YPVPTKKETQ GRTDLYIGRW
201: MQSKPRDKVI LATKVSGYSE RSTYLRDNAE VVRVDAANIK ESVEKSLSRL NTDYIDLLQI HWPDRYVPIF GEFSYNSTKW RPSVPFEDQL KAFQELIDEG
301: KVRYIGVSNE TSYGVMEFVQ AAKLQGLPKI VSIQNSYSLI VRCRFEVDLV EVCHPNNCNI GLLAYSPLAG GVLSGKYLDA NSANAKRSRL NLFPGYMERY
401: NASLAKEATD EYVKLAKKHG LTPVQLALGF VRDRPFTAST IIGATTMDQL KENIDAFTSA PRPLPPQVLD DIEILFKKYK DPAIL
101: LPGSTARRSQ RWHARRLRSQ VRAQAQDGLQ YKKLGDSDLL VSEITLGTMT FGEQNTEKEA HDMLSYSLDQ GINILDTAEM YPVPTKKETQ GRTDLYIGRW
201: MQSKPRDKVI LATKVSGYSE RSTYLRDNAE VVRVDAANIK ESVEKSLSRL NTDYIDLLQI HWPDRYVPIF GEFSYNSTKW RPSVPFEDQL KAFQELIDEG
301: KVRYIGVSNE TSYGVMEFVQ AAKLQGLPKI VSIQNSYSLI VRCRFEVDLV EVCHPNNCNI GLLAYSPLAG GVLSGKYLDA NSANAKRSRL NLFPGYMERY
401: NASLAKEATD EYVKLAKKHG LTPVQLALGF VRDRPFTAST IIGATTMDQL KENIDAFTSA PRPLPPQVLD DIEILFKKYK DPAIL
001: MASSYVTYST VTPVVSSSNI RGVFRLAFTR RRVTLSPNAR RRILRVSAKA STKNAMEYRK LGDSDLNISE VTMGTMTFGE QNTEKESHEM LSYAIEEGIN
101: CIDTAEAYPI PMKKETQGKT DLYISSWLKS QQRDKIVLAT KVCGYSERSA YIRDSGEILR VDAANIKESV EKSLKRLGTD YIDLLQIHWP DRYVPLFGDF
201: YYETSKWRPS VPFAEQLRAF QDLIVEGKVR YIGVSNETSY GVTEFVNTAK LEGLPKIVSI QNGYSLLVRC RYEVDLVEVC HPKNCNVGLL AYSPLGGGSL
301: SGKYLATDQE ATKNARLNLF PGYMERYKGS LAKEATIQYV EVAKKYGLTP VELALGFVRD RPFVTSTIIG ATSVKQLKED IDAFLMTERP FSQEVMADID
401: AVFKRFKDPS FV
101: CIDTAEAYPI PMKKETQGKT DLYISSWLKS QQRDKIVLAT KVCGYSERSA YIRDSGEILR VDAANIKESV EKSLKRLGTD YIDLLQIHWP DRYVPLFGDF
201: YYETSKWRPS VPFAEQLRAF QDLIVEGKVR YIGVSNETSY GVTEFVNTAK LEGLPKIVSI QNGYSLLVRC RYEVDLVEVC HPKNCNVGLL AYSPLGGGSL
301: SGKYLATDQE ATKNARLNLF PGYMERYKGS LAKEATIQYV EVAKKYGLTP VELALGFVRD RPFVTSTIIG ATSVKQLKED IDAFLMTERP FSQEVMADID
401: AVFKRFKDPS FV
Arabidopsis Description
NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ23]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.