CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93819	Sorghum	plastid	87.41	88.28
Os03t0611200-01	Rice	plastid	79.51	79.51
TraesCS4A01G235500.1	Wheat	plastid	79.51	79.51
TraesCS4D01G078200.1	Wheat	plastid	79.51	79.51
TraesCS4B01G079400.1	Wheat	plastid	79.01	79.01
TraesCS4A01G235300.1	Wheat	plastid	73.83	74.75
Zm00001d033338_P002	Maize	plastid	86.67	74.52
TraesCS4D01G078600.1	Wheat	plastid	75.06	73.43
TraesCS4B01G079600.1	Wheat	mitochondrion	56.3	72.38
HORVU4Hr1G013600.1	Barley	mitochondrion	33.58	67.66
PGSC0003DMT400042008	Potato	cytosol, plastid	66.42	67.25
Solyc06g053600.2.1	Tomato	plastid	65.93	66.58
GSMUA_Achr4P04780_001	Banana	plastid	69.38	66.43
HORVU4Hr1G013530.5	Barley	mitochondrion	79.51	66.39
KRH69116	Soybean	plastid	68.4	65.8
VIT_05s0049g01130.t01	Wine grape	plastid	66.42	64.35
AT1G04420.1	Thale cress	plastid	62.96	61.89
CDY18231	Canola	cytosol	60.25	59.08
Bra015315.1-P	Field mustard	cytosol	59.51	57.38
CDX89825	Canola	plastid	61.98	54.8
EES06018	Sorghum	mitochondrion	24.44	30.18
EER87770	Sorghum	cytosol	23.21	27.17
EER91589	Sorghum	cytosol	22.72	26.98
OQU80724	Sorghum	cytosol, endoplasmic reticulum, peroxisome	38.02	26.6
EER97210	Sorghum	cytosol, mitochondrion	22.47	26.07
KXG33406	Sorghum	mitochondrion	20.25	25.95
EER97869	Sorghum	cytosol	22.47	25.78
EES03282	Sorghum	cytosol	21.98	25.5
OQU76240	Sorghum	mitochondrion	21.98	25.07
OQU87178	Sorghum	cytosol	21.23	25.0
KXG19188	Sorghum	cytosol	22.47	23.39
EER93936	Sorghum	plastid	20.74	22.64
KXG32909	Sorghum	plastid	21.23	22.4
OQU82703	Sorghum	plastid	7.9	20.78
KXG26676	Sorghum	mitochondrion, plastid	19.51	20.73
EER95858	Sorghum	mitochondrion	18.02	19.36
OQU82702	Sorghum	mitochondrion	5.19	18.1

Protein Annotations

Gene3D:3.20.20.100	MapMan:35.1	UniProt:A0A1Z5S611	InterPro:Aldo/keto_reductase	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	ProteinID:OQU91376.1	EnsemblPlants:OQU91377	ProteinID:OQU91377	ProteinID:OQU91377.1	PFAM:PF00248
PRINTS:PR00069	PANTHER:PTHR43364	PANTHER:PTHR43364:SF4	EnsemblPlantsGene:SORBI_3001G168250	SUPFAM:SSF51430	UniParc:UPI000B424C32

Description

hypothetical protein

Coordinates

chr1:-:13990960..14016558

Molecular Weight (calculated)

45678.9 Da

IEP (calculated)

7.958

GRAVY (calculated)

-0.269

Length

405 amino acids

Sequence
(BLAST)

001: MLQMTMPSFA VTSPSSHGGT LSVLHARHSQ RLHKRHIRSQ VRAVAQTQLQ YQKLGDSDLL ISEVTLGTMT FGEQNTEKEA HDMLSYSFDK GVNILDTAEI
101: YPLPFKKETQ GRTDLYIGRW MQLKPRDKII LATKVAGYSE RFTFLRDHAE VVRVDASNIK ESVEKSLKRL STDYIDLLQI HWPDRYVALF GEFSYNPTKW
201: RPSFPFEEQL KAFQELIDEG KVRYIGVSNE TSYGVMEFVH AAKAQGLPKI VSIQNCYSLL VRCCFEADLV EVCHPHNCNI GLLANSPLAG GVLTGKYLDA
301: DTGISKGSRL NIFPGFMARY NAPLTQEATN EYIRLAKKHG LTPVQLALGF VRDRPFTTSS IIGATTMDHL KENIDVFTSA PRPLPQEVLD GIDDIFKRYK
401: DPAIL

Best Arabidopsis Sequence Match ( AT1G04420.1 )
(BLAST)

001: MASSYVTYST VTPVVSSSNI RGVFRLAFTR RRVTLSPNAR RRILRVSAKA STKNAMEYRK LGDSDLNISE VTMGTMTFGE QNTEKESHEM LSYAIEEGIN
101: CIDTAEAYPI PMKKETQGKT DLYISSWLKS QQRDKIVLAT KVCGYSERSA YIRDSGEILR VDAANIKESV EKSLKRLGTD YIDLLQIHWP DRYVPLFGDF
201: YYETSKWRPS VPFAEQLRAF QDLIVEGKVR YIGVSNETSY GVTEFVNTAK LEGLPKIVSI QNGYSLLVRC RYEVDLVEVC HPKNCNVGLL AYSPLGGGSL
301: SGKYLATDQE ATKNARLNLF PGYMERYKGS LAKEATIQYV EVAKKYGLTP VELALGFVRD RPFVTSTIIG ATSVKQLKED IDAFLMTERP FSQEVMADID
401: AVFKRFKDPS FV

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ23]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.