CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 8
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G199700.1	Wheat	plastid	88.95	88.0
TraesCS1D01G184400.1	Wheat	plastid	88.68	87.73
TraesCS1A01G180800.1	Wheat	plastid	88.14	87.2
Os10t0517400-01	Rice	plasma membrane	87.87	86.93
HORVU1Hr1G047820.1	Barley	cytosol, peroxisome, plastid	87.6	76.83
VIT_16s0098g01180.t01	Wine grape	cytosol, nucleus, peroxisome	66.58	76.23
GSMUA_Achr3P18270_001	Banana	plastid	73.58	72.22
KRH53587	Soybean	plastid	70.08	72.02
Bra003045.1-P	Field mustard	plastid	69.0	70.91
PGSC0003DMT400047623	Potato	plastid	70.62	70.81
Solyc03g082560.2.1	Tomato	nucleus	70.62	70.81
CDY20245	Canola	plastid	69.0	70.72
CDY14368	Canola	plastid	68.73	70.64
AT5G53580.1	Thale cress	plastid	69.27	70.41
EER95858	Sorghum	mitochondrion	37.2	36.6
KXG26676	Sorghum	mitochondrion, plastid	37.47	36.48
EER87770	Sorghum	cytosol	24.53	26.3
EER91589	Sorghum	cytosol	23.72	25.81
EER97869	Sorghum	cytosol	23.99	25.21
OQU82702	Sorghum	mitochondrion	7.82	25.0
OQU76240	Sorghum	mitochondrion	23.72	24.79
EES06018	Sorghum	mitochondrion	21.83	24.7
EER97210	Sorghum	cytosol, mitochondrion	23.18	24.64
KXG19188	Sorghum	cytosol	25.07	23.91
OQU87178	Sorghum	cytosol	21.83	23.55
EES03282	Sorghum	cytosol	22.1	23.5
KXG33406	Sorghum	mitochondrion	18.6	21.84
EER93819	Sorghum	plastid	23.18	21.45
KXG32909	Sorghum	plastid	21.83	21.09
OQU82703	Sorghum	plastid	8.63	20.78
OQU91377	Sorghum	plastid	22.64	20.74
OQU80724	Sorghum	cytosol, endoplasmic reticulum, peroxisome	21.83	13.99

Protein Annotations

Gene3D:3.20.20.100	MapMan:35.1	EntrezGene:8065692	InterPro:Aldo/keto_reductase	UniProt:C5WVD5	EnsemblPlants:EER93936
ProteinID:EER93936	ProteinID:EER93936.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009443	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016491
GO:GO:0042821	GO:GO:0050236	GO:GO:0055114	GO:GO:0070402	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PRINTS:PR00069	PANTHER:PTHR43625	PANTHER:PTHR43625:SF5	EnsemblPlantsGene:SORBI_3001G193700
SUPFAM:SSF51430	unigene:Sbi.20265	UniParc:UPI0001A8270A	RefSeq:XP_002466938.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:17242837..17248946

Molecular Weight (calculated)

40199.0 Da

IEP (calculated)

8.871

GRAVY (calculated)

0.016

Length

371 amino acids

Sequence
(BLAST)

001: MALLPAAGAA APATPSAAKP CGLRRPSAPP AAALRLGPLF WPWEKVKIGP LSVSPMGFGT WAWGNQLLWG YEESMDNELQ DCFNLALRNG INLFDTADSY
101: GTGRLNGQSE RLLGKFILEC EGTIKSPDDV IIATKFAAYP WRLTSGQFVS ACKSSLERLQ LDRLGIGQLH WSTANYAPLQ ERALWDGLVE MYDKGLVSAV
201: GVSNYGPKQL LKIHSYLASK GVPLSSAQVQ FSLLSMGDDQ MELKTVCDSL GIRLIAYSPL GLGMLTGKYD ASNLPKGPRS VLFRQILPGL ESLLSCLRRI
301: AEKKGKTMSQ VAINWCICKG TIPIPGVKMV RHVEENLGAL GWRLSSAEIA ELEAAAMAAP KKMVQNVFQT A

Best Arabidopsis Sequence Match ( AT5G53580.1 )
(BLAST)

001: MALTLSTTKT FTNINCSNNT SNITTFKPLK LPLFWPWQKV KMGPLSVSPM GFGTWAWGNQ LLWGYQTSMD DQLQQAFELA LENGINLFDT ADSYGTGRLN
101: GQSERLLGKF IKESQGLKGK QNEVVVATKF AAYPWRLTSG QFVNACRASL DRLQIDQLGI GQLHWSTASY APLQELVLWD GLVQMYEKGL VRAVGVSNYG
201: PQQLVKIHDY LKTRGVPLCS AQVQFSLLSM GKEQLEIKSI CDELGIRLIS YSPLGLGMLT GKYSSSKLPT GPRSLLFRQI LPGLEPLLLA LSEIAKKRGK
301: TMPQVAINWC ICKGTVPIPG IKSVRHVEDN LGALGWKLTN DEQLQLEYAA KESPKSMIQN IFQTR

Arabidopsis Description

PLR1Pyridoxal reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q56Y42]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.