Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- peroxisome 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH53587 | Soybean | plastid | 86.11 | 77.29 |
| PGSC0003DMT400047623 | Potato | plastid | 87.35 | 76.49 |
| Solyc03g082560.2.1 | Tomato | nucleus | 86.73 | 75.95 |
| Bra003045.1-P | Field mustard | plastid | 80.56 | 72.3 |
| AT5G53580.1 | Thale cress | plastid | 80.86 | 71.78 |
| CDY14368 | Canola | plastid | 79.94 | 71.75 |
| CDY20245 | Canola | plastid | 79.94 | 71.55 |
| GSMUA_Achr3P18270_001 | Banana | plastid | 82.1 | 70.37 |
| Os10t0517400-01 | Rice | plasma membrane | 77.16 | 66.67 |
| EER93936 | Sorghum | plastid | 76.23 | 66.58 |
| TraesCS1D01G184400.1 | Wheat | plastid | 76.85 | 66.4 |
| TraesCS1B01G199700.1 | Wheat | plastid | 76.85 | 66.4 |
| TraesCS1A01G180800.1 | Wheat | plastid | 76.54 | 66.13 |
| HORVU1Hr1G047820.1 | Barley | cytosol, peroxisome, plastid | 76.54 | 58.63 |
| VIT_12s0028g01100.t01 | Wine grape | plastid | 42.28 | 37.33 |
| VIT_14s0030g02010.t01 | Wine grape | extracellular, mitochondrion | 9.26 | 27.03 |
| VIT_05s0062g01000.t01 | Wine grape | cytosol | 25.0 | 25.63 |
| VIT_05s0062g00980.t01 | Wine grape | cytosol | 24.69 | 25.16 |
| VIT_14s0030g01960.t01 | Wine grape | cytosol | 26.23 | 25.07 |
| VIT_05s0062g01010.t01 | Wine grape | cytosol | 24.38 | 25.0 |
| VIT_05s0020g04130.t01 | Wine grape | cytosol | 26.54 | 24.93 |
| VIT_14s0030g01980.t01 | Wine grape | cytosol | 26.23 | 24.85 |
| VIT_14s0030g02020.t01 | Wine grape | cytosol | 26.54 | 24.78 |
| VIT_07s0104g01010.t01 | Wine grape | cytosol, extracellular, nucleus, plastid | 13.89 | 24.59 |
| VIT_05s0062g00990.t01 | Wine grape | cytosol, extracellular | 11.42 | 24.5 |
| VIT_14s0030g02050.t01 | Wine grape | cytosol | 25.31 | 23.91 |
| VIT_05s0051g00650.t01 | Wine grape | mitochondrion | 24.07 | 23.78 |
| VIT_14s0030g01970.t01 | Wine grape | cytosol | 25.31 | 23.63 |
| VIT_05s0062g00950.t01 | Wine grape | cytosol | 14.2 | 23.0 |
| VIT_14s0030g01990.t01 | Wine grape | cytosol | 24.38 | 22.51 |
| VIT_14s0030g02060.t01 | Wine grape | peroxisome | 24.38 | 22.51 |
| VIT_05s0049g01130.t01 | Wine grape | plastid | 22.22 | 17.22 |
Protein Annotations
| EntrezGene:100258867 | wikigene:100258867 | Gene3D:3.20.20.100 | MapMan:35.1 | InterPro:Aldo/ket_reductase_CS | InterPro:Aldo/keto_reductase |
| ProteinID:CCB48077 | ProteinID:CCB48077.1 | UniProt:F6H754 | EMBL:FN595247 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPR036812 | EntrezGene:LOC100258867 |
| wikigene:LOC100258867 | InterPro:NADP_OxRdtase_dom | InterPro:NADP_OxRdtase_dom_sf | PFAM:PF00248 | PRINTS:PR00069 | ScanProsite:PS00062 |
| PANTHER:PTHR43625 | PANTHER:PTHR43625:SF5 | SUPFAM:SSF51430 | UniParc:UPI00015CB683 | ArrayExpress:VIT_16s0098g01180 | EnsemblPlantsGene:VIT_16s0098g01180 |
| EnsemblPlants:VIT_16s0098g01180.t01 | unigene:Vvi.17869 | RefSeq:XP_002273477 | RefSeq:XP_002273477.1 | : | : |
Description
No Description!
Coordinates
chr16:+:21441948..21447272
Molecular Weight (calculated)
36037.9 Da
IEP (calculated)
9.482
GRAVY (calculated)
-0.177
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPLTVSPMG FGTWAWGNQL LWGYQESMDS DLQRTFNLAV ENGINLFDTA DSYGTGRLNG QSEKLLGKFI REFQGQKQIQ DNIVIATKFA AYPWRLTPGQ
101: FVNACKSSLD RMQLEQIGIG QLHWSTANYA PLQELALWDG LVAMYEKGLV RAVGVSNYGP KQLVKIHDYL KARGVPLCSA QVQFSLLSKG EDQIEIKNIC
201: GSLGIRLISY SPLGLGMLTG KYTPSKLPRG PRALLFRQIL PGLEPLLNSL REIAQKRRKT IPQVAINWCI CQGTIPIPGV KTVKQVEENL GALGWRLSSD
301: ELLQLEDAAR ESPGKMIQNI FQTR
101: FVNACKSSLD RMQLEQIGIG QLHWSTANYA PLQELALWDG LVAMYEKGLV RAVGVSNYGP KQLVKIHDYL KARGVPLCSA QVQFSLLSKG EDQIEIKNIC
201: GSLGIRLISY SPLGLGMLTG KYTPSKLPRG PRALLFRQIL PGLEPLLNSL REIAQKRRKT IPQVAINWCI CQGTIPIPGV KTVKQVEENL GALGWRLSSD
301: ELLQLEDAAR ESPGKMIQNI FQTR
001: MALTLSTTKT FTNINCSNNT SNITTFKPLK LPLFWPWQKV KMGPLSVSPM GFGTWAWGNQ LLWGYQTSMD DQLQQAFELA LENGINLFDT ADSYGTGRLN
101: GQSERLLGKF IKESQGLKGK QNEVVVATKF AAYPWRLTSG QFVNACRASL DRLQIDQLGI GQLHWSTASY APLQELVLWD GLVQMYEKGL VRAVGVSNYG
201: PQQLVKIHDY LKTRGVPLCS AQVQFSLLSM GKEQLEIKSI CDELGIRLIS YSPLGLGMLT GKYSSSKLPT GPRSLLFRQI LPGLEPLLLA LSEIAKKRGK
301: TMPQVAINWC ICKGTVPIPG IKSVRHVEDN LGALGWKLTN DEQLQLEYAA KESPKSMIQN IFQTR
101: GQSERLLGKF IKESQGLKGK QNEVVVATKF AAYPWRLTSG QFVNACRASL DRLQIDQLGI GQLHWSTASY APLQELVLWD GLVQMYEKGL VRAVGVSNYG
201: PQQLVKIHDY LKTRGVPLCS AQVQFSLLSM GKEQLEIKSI CDELGIRLIS YSPLGLGMLT GKYSSSKLPT GPRSLLFRQI LPGLEPLLLA LSEIAKKRGK
301: TMPQVAINWC ICKGTVPIPG IKSVRHVEDN LGALGWKLTN DEQLQLEYAA KESPKSMIQN IFQTR
Arabidopsis Description
PLR1Pyridoxal reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q56Y42]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.