Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 3
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043967_P001 | Maize | extracellular | 26.23 | 40.0 |
| Solyc09g074310.2.1 | Tomato | endoplasmic reticulum, extracellular | 72.68 | 37.05 |
| PGSC0003DMT400043415 | Potato | endoplasmic reticulum, extracellular | 72.13 | 36.77 |
| GSMUA_Achr2P02520_001 | Banana | extracellular, plasma membrane | 71.58 | 36.69 |
| KRH59094 | Soybean | extracellular, peroxisome, plastid | 70.49 | 36.03 |
| KRH42967 | Soybean | extracellular | 68.85 | 35.2 |
| TraesCS3D01G080800.1 | Wheat | cytosol | 65.03 | 33.15 |
| TraesCS3A01G080900.1 | Wheat | cytosol | 65.03 | 33.15 |
| HORVU3Hr1G014470.2 | Barley | cytosol | 64.48 | 32.87 |
| HORVU3Hr1G014430.1 | Barley | cytosol | 58.47 | 31.85 |
| Os11t0645200-01 | Rice | extracellular | 57.92 | 31.27 |
| TraesCS3B01G095500.1 | Wheat | cytosol | 31.15 | 22.98 |
| Zm00001d031970_P001 | Maize | cytosol | 27.32 | 22.42 |
| VIT_05s0049g01130.t01 | Wine grape | plastid | 50.82 | 22.25 |
| OQU80724 | Sorghum | cytosol, endoplasmic reticulum, peroxisome | 65.03 | 20.55 |
| VIT_14s0030g02010.t01 | Wine grape | extracellular, mitochondrion | 11.48 | 18.92 |
| VIT_14s0030g01980.t01 | Wine grape | cytosol | 29.51 | 15.79 |
| VIT_14s0030g02050.t01 | Wine grape | cytosol | 28.96 | 15.45 |
| VIT_14s0030g02020.t01 | Wine grape | cytosol | 28.96 | 15.27 |
| VIT_14s0030g01970.t01 | Wine grape | cytosol | 27.87 | 14.7 |
| VIT_05s0051g00650.t01 | Wine grape | mitochondrion | 26.23 | 14.63 |
| VIT_14s0030g01960.t01 | Wine grape | cytosol | 26.78 | 14.45 |
| VIT_05s0020g04130.t01 | Wine grape | cytosol | 26.23 | 13.91 |
| VIT_16s0098g01180.t01 | Wine grape | cytosol, nucleus, peroxisome | 24.59 | 13.89 |
| VIT_05s0062g00980.t01 | Wine grape | cytosol | 24.04 | 13.84 |
| VIT_12s0028g01100.t01 | Wine grape | plastid | 26.78 | 13.35 |
| VIT_05s0062g01000.t01 | Wine grape | cytosol | 22.95 | 13.29 |
| VIT_14s0030g01990.t01 | Wine grape | cytosol | 24.59 | 12.82 |
| VIT_14s0030g02060.t01 | Wine grape | peroxisome | 24.59 | 12.82 |
| VIT_05s0062g01010.t01 | Wine grape | cytosol | 21.86 | 12.66 |
| VIT_05s0062g00950.t01 | Wine grape | cytosol | 7.65 | 7.0 |
| VIT_05s0062g00990.t01 | Wine grape | cytosol, extracellular | 1.64 | 1.99 |
Protein Annotations
| ArrayExpress:VIT_07s0104g01010 | EMBL:FN596005 | EnsemblPlants:VIT_07s0104g01010.t01 | EnsemblPlantsGene:VIT_07s0104g01010 | Gene3D:3.20.20.100 | InterPro:IPR036812 |
| InterPro:NADP_OxRdtase_dom | InterPro:NADP_OxRdtase_dom_sf | PANTHER:PTHR43147 | PANTHER:PTHR43147:SF2 | PFAM:PF00248 | ProteinID:CCB56790 |
| ProteinID:CCB56790.1 | SUPFAM:SSF51430 | UniParc:UPI0002108B4C | UniProt:F6HQ34 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr7:+:2100008..2102469
Molecular Weight (calculated)
20813.2 Da
IEP (calculated)
6.515
GRAVY (calculated)
-0.063
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVPVFNLAP DLTVSRLCLG TMTFGEQNSL SQSFGLLSLA FHSGINFFDS AEIYPVPQRA ETQGKSEEYI GRWIRETKIP VIALSWRQSL KRLRTNYIDL
101: YQIHWPDRYV PMFGETEYDP TRQFSSVFIE EQLDALGRAV DAGKIRCIGL SNETPYGVMK FLQIAEHIPG HPKIISVQVL IML
101: YQIHWPDRYV PMFGETEYDP TRQFSSVFIE EQLDALGRAV DAGKIRCIGL SNETPYGVMK FLQIAEHIPG HPKIISVQVL IML
001: MASSYVTYST VTPVVSSSNI RGVFRLAFTR RRVTLSPNAR RRILRVSAKA STKNAMEYRK LGDSDLNISE VTMGTMTFGE QNTEKESHEM LSYAIEEGIN
101: CIDTAEAYPI PMKKETQGKT DLYISSWLKS QQRDKIVLAT KVCGYSERSA YIRDSGEILR VDAANIKESV EKSLKRLGTD YIDLLQIHWP DRYVPLFGDF
201: YYETSKWRPS VPFAEQLRAF QDLIVEGKVR YIGVSNETSY GVTEFVNTAK LEGLPKIVSI QNGYSLLVRC RYEVDLVEVC HPKNCNVGLL AYSPLGGGSL
301: SGKYLATDQE ATKNARLNLF PGYMERYKGS LAKEATIQYV EVAKKYGLTP VELALGFVRD RPFVTSTIIG ATSVKQLKED IDAFLMTERP FSQEVMADID
401: AVFKRFKDPS FV
101: CIDTAEAYPI PMKKETQGKT DLYISSWLKS QQRDKIVLAT KVCGYSERSA YIRDSGEILR VDAANIKESV EKSLKRLGTD YIDLLQIHWP DRYVPLFGDF
201: YYETSKWRPS VPFAEQLRAF QDLIVEGKVR YIGVSNETSY GVTEFVNTAK LEGLPKIVSI QNGYSLLVRC RYEVDLVEVC HPKNCNVGLL AYSPLGGGSL
301: SGKYLATDQE ATKNARLNLF PGYMERYKGS LAKEATIQYV EVAKKYGLTP VELALGFVRD RPFVTSTIIG ATSVKQLKED IDAFLMTERP FSQEVMADID
401: AVFKRFKDPS FV
Arabidopsis Description
NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ23]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.