Factsheet for VIT_12s0028g01100.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
peroxisome 1
plasma membrane 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400041157	Potato	plastid	83.92	83.92
Solyc07g043570.2.1	Tomato	plastid	80.65	83.38
KRG99028	Soybean	plastid	80.65	80.43
KRH45977	Soybean	plastid	80.38	80.16
GSMUA_Achr4P31780_001	Banana	mitochondrion	77.66	76.82
CDY15588	Canola	plastid	77.11	75.07
TraesCS2A01G254100.1	Wheat	mitochondrion, plastid	75.75	74.93
CDX86514	Canola	plastid	76.84	74.8
AT1G06690.1	Thale cress	plastid	76.84	74.8
TraesCS2B01G268000.1	Wheat	mitochondrion, plastid	75.48	74.66
TraesCS2D01G254500.1	Wheat	mitochondrion, plastid	75.48	74.66
Bra030661.1-P	Field mustard	plastid	76.57	74.54
Os07t0143000-01	Rice	mitochondrion, plastid	76.29	74.27
EER95858	Sorghum	mitochondrion	76.02	74.01
HORVU2Hr1G060710.1	Barley	mitochondrion, plastid	74.11	73.32
Zm00001d003086_P001	Maize	plastid	70.3	68.98
Os07t0142900-01	Rice	plastid	70.03	68.35
KXG26676	Sorghum	mitochondrion, plastid	70.3	67.72
TraesCS2D01G254700.1	Wheat	cytosol, mitochondrion	68.94	67.65
Zm00001d007858_P001	Maize	plastid	75.48	67.4
TraesCS2B01G267900.1	Wheat	mitochondrion	68.39	67.11
HORVU2Hr1G060730.2	Barley	cytosol, mitochondrion	68.94	66.93
TraesCS2A01G254200.1	Wheat	mitochondrion	68.12	66.84
VIT_16s0098g01180.t01	Wine grape	cytosol, nucleus, peroxisome	37.33	42.28
VIT_14s0030g02010.t01	Wine grape	extracellular, mitochondrion	9.54	31.53
VIT_05s0062g01000.t01	Wine grape	cytosol	25.89	30.06
VIT_05s0062g00990.t01	Wine grape	cytosol, extracellular	12.26	29.8
VIT_05s0062g00980.t01	Wine grape	cytosol	25.07	28.93
VIT_05s0020g04130.t01	Wine grape	cytosol	26.98	28.7
VIT_14s0030g01960.t01	Wine grape	cytosol	26.43	28.61
VIT_05s0062g01010.t01	Wine grape	cytosol	24.52	28.48
VIT_14s0030g01970.t01	Wine grape	cytosol	26.43	27.95
VIT_14s0030g01980.t01	Wine grape	cytosol	25.89	27.78
VIT_05s0062g00950.t01	Wine grape	cytosol	14.99	27.5
VIT_14s0030g02020.t01	Wine grape	cytosol	25.89	27.38
VIT_07s0104g01010.t01	Wine grape	cytosol, extracellular, nucleus, plastid	13.35	26.78
VIT_14s0030g02050.t01	Wine grape	cytosol	24.8	26.53
VIT_14s0030g01990.t01	Wine grape	cytosol	25.07	26.21
VIT_14s0030g02060.t01	Wine grape	peroxisome	25.07	26.21
VIT_05s0051g00650.t01	Wine grape	mitochondrion	20.98	23.48
VIT_05s0049g01130.t01	Wine grape	plastid	21.8	19.14

Protein Annotations

EntrezGene:100257375	wikigene:100257375	Gene3D:3.20.20.100	MapMan:35.1	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase
ProteinID:CBI22066	ProteinID:CBI22066.3	UniProt:E0CU00	EMBL:FN595235	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009941	GO:GO:0010287
GO:GO:0016020	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812	EntrezGene:LOC100257375	wikigene:LOC100257375
InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PRINTS:PR00069	ScanProsite:PS00062	PANTHER:PTHR43625
PANTHER:PTHR43625:SF20	SUPFAM:SSF51430	TIGR:TC62480	UniParc:UPI00015C9D6C	ArrayExpress:VIT_12s0028g01100	EnsemblPlantsGene:VIT_12s0028g01100
EnsemblPlants:VIT_12s0028g01100.t01	unigene:Vvi.2584	RefSeq:XP_002278419	RefSeq:XP_002278419.1	RefSeq:XP_010657100.1	SEG:seg

Description

No Description!

Coordinates

chr12:+:1637785..1643792

Molecular Weight (calculated)

40477.5 Da

IEP (calculated)

7.099

GRAVY (calculated)

-0.201

Length

367 amino acids

Sequence
(BLAST)

001: MALYVSSACF CGFSQKRVER IKAVASEGFA TVKTEEEKVK LGGSDLKVTK LGIGAWSWGD TSYWNNFEWD DRKMKAAKGA FDASIDVGIT LFDTAEVYGS
101: RFSFGAINSE TLLGRFIKER KEKNPEVEVA VATKFAALPW RFGRQSVITA LKDSLCRLGL LSVDLYQLHW PGVWGNEGYI DGLGDAVEMG LVKAVGVSNY
201: SEKRLLEAYE KLKKRGIPLA SNQVNYSLLY RLPEENGVKA ACDELGVTLI AYSPIAQGAL TGKYTPGNPP TGPRGRIYTP EFLAKLQPLL NRIMEIGQNY
301: DKTPTQVVLN WLICQENVVP IPGAKNAEQA KEFSGALGWR LTDDEINELR SLASETKPVI GFPVENL

Best Arabidopsis Sequence Match ( AT1G06690.1 )
(BLAST)

001: MAMATHFTFP FNYVVSEGSH GRRSFVRKLV RAVASGDSVA PAISEESKVK LGGSDLKVTK LGIGVWSWGD NSYWNDFQWD DRKLKAAKGA FDTSLDNGID
101: FFDTAEVYGS KFSLGAISSE TLLGRFIRER KERYPGAEVS VATKFAALPW RFGRESVVTA LKDSLSRLEL SSVDLYQLHW PGLWGNEGYL DGLGDAVEQG
201: LVKAVGVSNY SEKRLRDAYE RLKKRGIPLA SNQVNYSLIY RAPEQTGVKA ACDELGVTLI AYSPIAQGAL TGKYTPENPP SGPRGRIYTR EFLTKLQPLL
301: NRIKQIGENY SKTPTQIALN WLVAQGNVIP IPGAKNAEQA KEFAGAIGWS LTDNEVSELR SLASEIKPVV GFPVEYL

Arabidopsis Description

Uncharacterized oxidoreductase At1g06690, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94A68]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.