Factsheet for TraesCS2A01G254100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 3
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G254500.1	Wheat	mitochondrion, plastid	98.65	98.65
TraesCS2B01G268000.1	Wheat	mitochondrion, plastid	98.65	98.65
HORVU2Hr1G060710.1	Barley	mitochondrion, plastid	97.03	97.03
Os07t0143000-01	Rice	mitochondrion, plastid	86.79	85.41
EER95858	Sorghum	mitochondrion	83.56	82.23
GSMUA_Achr4P31780_001	Banana	mitochondrion	76.82	76.82
Zm00001d007858_P001	Maize	plastid	84.1	75.91
Solyc07g043570.2.1	Tomato	plastid	72.51	75.77
VIT_12s0028g01100.t01	Wine grape	plastid	74.93	75.75
PGSC0003DMT400041157	Potato	plastid	74.12	74.93
TraesCS2A01G254200.1	Wheat	mitochondrion	74.12	73.53
KRG99028	Soybean	plastid	71.7	72.28
KRH45977	Soybean	plastid	71.43	72.01
CDY15588	Canola	plastid	72.78	71.62
AT1G06690.1	Thale cress	plastid	72.51	71.35
Bra030661.1-P	Field mustard	plastid	72.24	71.09
CDX86514	Canola	plastid	71.97	70.82
TraesCS1A01G180800.1	Wheat	plastid	38.27	37.87
TraesCS3A01G222900.1	Wheat	cytosol, golgi, nucleus	29.11	31.67
TraesCS7A01G184900.1	Wheat	cytosol	27.76	30.29
TraesCS2A01G274700.1	Wheat	cytosol, mitochondrion, peroxisome	27.49	29.48
TraesCS7A01G185000.1	Wheat	cytosol	27.49	29.48
TraesCS2A01G274800.1	Wheat	cytosol	27.22	29.11
TraesCS4A01G349500.1	Wheat	cytosol	15.63	29.0
TraesCS2A01G326100.1	Wheat	mitochondrion	26.95	28.82
TraesCS7A01G195600.1	Wheat	cytosol	26.42	28.74
TraesCS2A01G325800.2	Wheat	cytosol, mitochondrion	26.15	27.32
TraesCS3A01G080900.1	Wheat	cytosol	23.72	24.51
TraesCS5A01G331200.1	Wheat	cytosol	14.82	23.81
TraesCS6A01G392700.1	Wheat	golgi	22.64	22.16
TraesCS4A01G235500.1	Wheat	plastid	21.29	19.51
TraesCS4A01G235300.1	Wheat	plastid	21.02	19.5

Protein Annotations

EnsemblPlants:TraesCS2A01G254100.1	EnsemblPlantsGene:TraesCS2A01G254100	Gene3D:3.20.20.100	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Aldo/ket_reductase_CS	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	PANTHER:PTHR43625	PANTHER:PTHR43625:SF22	PFAM:PF00248	ScanProsite:PS00062	SEG:seg
SUPFAM:SSF51430	TIGR:cd06660	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr2A:-:387039658..387042187

Molecular Weight (calculated)

39978.7 Da

IEP (calculated)

8.167

GRAVY (calculated)

-0.198

Length

371 amino acids

Sequence
(BLAST)

001: MALQVAGGAG CCGCLPLLGQ RRTAAFRPPR AVASEGAAVE DGSKVMLGGS GVAVTKLGIG AWSWGDTTYW NDFEWDDRKL KDAKGAFEAS LDSGITFFDT
101: AEVYGAGVSG AINSESLLGR FIKERKEKEG VEVAIATKFA ALPWRFGRGS VISALKGSLS RLGVSSVESY QLHWPGIWGN EGYLDGLADA YEQGLVKSVG
201: VSNYSEKRLR DAHERLKKRG VPLASNQVNY SLIYRNPEEN GVKAACDELG ITLIAYSPIA QGALTGKYTP ANPPTGPRGR IYTSDFLSKL QPLINKIREI
301: GGSYDKTPTQ VVLNWLICQG NVVPIPGAKN AEQAREFAGA LGWLLTEQEV EELRSMAREV KPVMGFPVEK L

Best Arabidopsis Sequence Match ( AT1G06690.1 )
(BLAST)

001: MAMATHFTFP FNYVVSEGSH GRRSFVRKLV RAVASGDSVA PAISEESKVK LGGSDLKVTK LGIGVWSWGD NSYWNDFQWD DRKLKAAKGA FDTSLDNGID
101: FFDTAEVYGS KFSLGAISSE TLLGRFIRER KERYPGAEVS VATKFAALPW RFGRESVVTA LKDSLSRLEL SSVDLYQLHW PGLWGNEGYL DGLGDAVEQG
201: LVKAVGVSNY SEKRLRDAYE RLKKRGIPLA SNQVNYSLIY RAPEQTGVKA ACDELGVTLI AYSPIAQGAL TGKYTPENPP SGPRGRIYTR EFLTKLQPLL
301: NRIKQIGENY SKTPTQIALN WLVAQGNVIP IPGAKNAEQA KEFAGAIGWS LTDNEVSELR SLASEIKPVV GFPVEYL

Arabidopsis Description

Uncharacterized oxidoreductase At1g06690, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94A68]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.