Factsheet for Solyc07g043570.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
peroxisome 1
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

plastid: 20363867
plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400041157	Potato	plastid	97.18	94.01
VIT_12s0028g01100.t01	Wine grape	plastid	83.38	80.65
GSMUA_Achr4P31780_001	Banana	mitochondrion	78.59	75.2
CDY15588	Canola	plastid	79.44	74.8
KRG99028	Soybean	plastid	77.46	74.73
KRH45977	Soybean	plastid	77.18	74.46
Bra030661.1-P	Field mustard	plastid	78.87	74.27
AT1G06690.1	Thale cress	plastid	78.59	74.01
CDX86514	Canola	plastid	78.59	74.01
Os07t0143000-01	Rice	mitochondrion, plastid	78.03	73.47
TraesCS2D01G254500.1	Wheat	mitochondrion, plastid	75.77	72.51
TraesCS2A01G254100.1	Wheat	mitochondrion, plastid	75.77	72.51
TraesCS2B01G268000.1	Wheat	mitochondrion, plastid	75.49	72.24
EER95858	Sorghum	mitochondrion	76.34	71.88
HORVU2Hr1G060710.1	Barley	mitochondrion, plastid	74.08	70.89
Zm00001d003086_P001	Maize	plastid	70.7	67.11
KXG26676	Sorghum	mitochondrion, plastid	71.27	66.4
HORVU2Hr1G060730.2	Barley	cytosol, mitochondrion	70.42	66.14
TraesCS2D01G254700.1	Wheat	cytosol, mitochondrion	69.58	66.04
TraesCS2B01G267900.1	Wheat	mitochondrion	69.58	66.04
TraesCS2A01G254200.1	Wheat	mitochondrion	69.58	66.04
Zm00001d007858_P001	Maize	plastid	76.34	65.94
Os07t0142900-01	Rice	plastid	69.3	65.43
Solyc03g082560.2.1	Tomato	nucleus	38.31	36.76
Solyc09g097970.2.1	Tomato	cytosol, extracellular	29.01	29.77
Solyc09g097960.2.1	Tomato	cytosol	28.45	29.19
Solyc09g098000.2.1	Tomato	cytosol	27.89	28.37
Solyc09g097980.2.1	Tomato	cytosol, extracellular	27.61	27.92
Solyc01g097390.2.1	Tomato	plastid	26.2	27.03
Solyc09g082730.2.1	Tomato	cytosol	26.2	26.88
Solyc09g098090.2.1	Tomato	cytosol	25.92	26.67
Solyc09g082720.2.1	Tomato	cytosol, plastid	25.92	26.67
Solyc01g065490.2.1	Tomato	cytosol	23.38	26.02
Solyc01g097380.1.1	Tomato	plastid	24.23	25.83
Solyc12g098150.1.1	Tomato	plastid	22.25	23.94
Solyc09g074310.2.1	Tomato	endoplasmic reticulum, extracellular	23.66	23.4
Solyc06g053600.2.1	Tomato	plastid	21.97	19.45
Solyc09g097950.1.1	Tomato	cytosol	7.32	17.45

Protein Annotations

Gene3D:3.20.20.100	MapMan:35.1	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009941	GO:GO:0010287
GO:GO:0016020	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812	UniProt:K4CEL4	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PRINTS:PR00069	ScanProsite:PS00062	PANTHER:PTHR43625	PANTHER:PTHR43625:SF20
SUPFAM:SSF51430	EnsemblPlantsGene:Solyc07g043570.2	EnsemblPlants:Solyc07g043570.2.1	UniParc:UPI000276C5D9	:	:

Description

No Description!

Coordinates

chr7:+:57484479..57491190

Molecular Weight (calculated)

39165.6 Da

IEP (calculated)

8.312

GRAVY (calculated)

-0.375

Length

355 amino acids

Sequence
(BLAST)

001: MRGQKQKIRG VAAESSVKLN SEEEDKVKLG GSDLKVTKLG IGAWSWGDTS YWNNFEWDDK KLKAAKTAFD ASIDSGITFI DTAEVYGSRF SFGAINSETL
101: LGRFIKERKE KDPEVEVAVA TKFAALPWRL GRQSVLAALK DSLARMELSS VDLYQLHWPG IWGNEGYIDG LGDAVEQGLV KAVGVSNYSE KRLRDAYEQL
201: KRRGIPLASN QVNYSLIYRL PEQNGVKAAC DELGVTLIAY SPIAQGALTG KYTPENPPTG PRGQIYTPEV LTKLQPLINR IKEIGDSYNK TSTQVVLNWL
301: IAQENVVPIP GAKNAEQAKE FGGALGWRLT QQEIDQLRSL ASELKPVTGF PVEKL

Best Arabidopsis Sequence Match ( AT1G06690.1 )
(BLAST)

001: MAMATHFTFP FNYVVSEGSH GRRSFVRKLV RAVASGDSVA PAISEESKVK LGGSDLKVTK LGIGVWSWGD NSYWNDFQWD DRKLKAAKGA FDTSLDNGID
101: FFDTAEVYGS KFSLGAISSE TLLGRFIRER KERYPGAEVS VATKFAALPW RFGRESVVTA LKDSLSRLEL SSVDLYQLHW PGLWGNEGYL DGLGDAVEQG
201: LVKAVGVSNY SEKRLRDAYE RLKKRGIPLA SNQVNYSLIY RAPEQTGVKA ACDELGVTLI AYSPIAQGAL TGKYTPENPP SGPRGRIYTR EFLTKLQPLL
301: NRIKQIGENY SKTPTQIALN WLVAQGNVIP IPGAKNAEQA KEFAGAIGWS LTDNEVSELR SLASEIKPVV GFPVEYL

Arabidopsis Description

Uncharacterized oxidoreductase At1g06690, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94A68]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.