Factsheet for Zm00001d003086_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 22065420

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26676	Sorghum	mitochondrion, plastid	96.26	94.49
Os07t0142900-01	Rice	plastid	87.43	86.97
TraesCS2D01G254700.1	Wheat	cytosol, mitochondrion	85.56	85.56
TraesCS2B01G267900.1	Wheat	mitochondrion	84.76	84.76
TraesCS2A01G254200.1	Wheat	mitochondrion	84.49	84.49
HORVU2Hr1G060730.2	Barley	cytosol, mitochondrion	84.76	83.86
GSMUA_Achr4P31780_001	Banana	mitochondrion	70.86	71.43
Solyc07g043570.2.1	Tomato	plastid	67.11	70.7
PGSC0003DMT400041157	Potato	plastid	68.98	70.3
VIT_12s0028g01100.t01	Wine grape	plastid	68.98	70.3
KRH45977	Soybean	plastid	67.91	69.02
KRG99028	Soybean	plastid	67.38	68.48
CDY15588	Canola	plastid	67.91	67.37
Zm00001d007858_P001	Maize	plastid	73.8	67.15
AT1G06690.1	Thale cress	plastid	67.65	67.11
Bra030661.1-P	Field mustard	plastid	67.38	66.84
CDX86514	Canola	plastid	67.38	66.84
Zm00001d044212_P001	Maize	cytosol, extracellular, mitochondrion	27.54	30.12
Zm00001d031666_P002	Maize	extracellular	27.54	29.77
Zm00001d043967_P001	Maize	extracellular	8.82	27.5
Zm00001d018485_P002	Maize	mitochondrion	22.99	26.22
Zm00001d051912_P001	Maize	mitochondrion	22.99	26.14
Zm00001d036024_P001	Maize	extracellular, mitochondrion	27.27	25.76
Zm00001d006365_P001	Maize	mitochondrion	27.01	24.82
Zm00001d011363_P002	Maize	cytosol	23.26	24.44
Zm00001d031970_P001	Maize	cytosol	13.64	22.87
Zm00001d033338_P002	Maize	plastid	22.46	17.83
Zm00001d032921_P001	Maize	cytosol	27.81	16.53
Zm00001d043151_P001	Maize	plastid	5.35	9.8

Protein Annotations

Gene3D:3.20.20.100	MapMan:35.1	InterPro:Aldo/ket_reductase_CS	UniProt:B4F9M8	EMBL:BT033816	EMBL:BT039476
EMBL:BT055168	EMBL:BT063829	EMBL:BT084595	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf
ProteinID:ONM16010.1	PFAM:PF00248	ScanProsite:PS00062	PANTHER:PTHR43625	PANTHER:PTHR43625:SF16	SUPFAM:SSF51430
UniParc:UPI00017B61FE	EnsemblPlantsGene:Zm00001d003086	EnsemblPlants:Zm00001d003086_P001	EnsemblPlants:Zm00001d003086_T001	SEG:seg	:

Description

Pyridoxal reductase chloroplastic

Coordinates

chr2:-:31747661..31753661

Molecular Weight (calculated)

40464.2 Da

IEP (calculated)

7.756

GRAVY (calculated)

-0.257

Length

374 amino acids

Sequence
(BLAST)

001: MALQVTGGVG CCCPPGSARR LPQAAALCRP PRAVVSGATR VVEEDEGKVR LGGSGVAVTK LGIGAWSWGD TTYWNDSEWD DRRLREAQDA FDASIDNGMT
101: FFDTAEVYGT ALMGAVNSET LLGGFIKERQ QKDQIEVSVA TKFAALPWRF GRGSVLSALK KSLDRLGLAS VELYQLHWPG IWGNEGYLDG LADAYEQGLV
201: KAVGVSNYNE KRLRDAHARL KKRGVPLAAN QVNYSLIYRT PELNGVKAAC DELGITLIAY SPIAQGVLTG KYTPENPPTG PRANTYTPEF LAKLQPLMNR
301: IKEIGASYGK SPTQVSLNWL TCQGNVVPIP GAKNASQAKE FAGALGWSLT GDEVEELRTL AREIKGIRMP IEES

Best Arabidopsis Sequence Match ( AT1G06690.1 )
(BLAST)

001: MAMATHFTFP FNYVVSEGSH GRRSFVRKLV RAVASGDSVA PAISEESKVK LGGSDLKVTK LGIGVWSWGD NSYWNDFQWD DRKLKAAKGA FDTSLDNGID
101: FFDTAEVYGS KFSLGAISSE TLLGRFIRER KERYPGAEVS VATKFAALPW RFGRESVVTA LKDSLSRLEL SSVDLYQLHW PGLWGNEGYL DGLGDAVEQG
201: LVKAVGVSNY SEKRLRDAYE RLKKRGIPLA SNQVNYSLIY RAPEQTGVKA ACDELGVTLI AYSPIAQGAL TGKYTPENPP SGPRGRIYTR EFLTKLQPLL
301: NRIKQIGENY SKTPTQIALN WLVAQGNVIP IPGAKNAEQA KEFAGAIGWS LTDNEVSELR SLASEIKPVV GFPVEYL

Arabidopsis Description

Uncharacterized oxidoreductase At1g06690, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94A68]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.