Factsheet for GSMUA_Achr4P31780_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g043570.2.1	Tomato	plastid	75.2	78.59
PGSC0003DMT400041157	Potato	plastid	77.09	77.93
Os07t0143000-01	Rice	mitochondrion, plastid	78.98	77.72
VIT_12s0028g01100.t01	Wine grape	plastid	76.82	77.66
TraesCS2D01G254500.1	Wheat	mitochondrion, plastid	77.09	77.09
TraesCS2A01G254100.1	Wheat	mitochondrion, plastid	76.82	76.82
TraesCS2B01G268000.1	Wheat	mitochondrion, plastid	76.55	76.55
HORVU2Hr1G060710.1	Barley	mitochondrion, plastid	76.55	76.55
EER95858	Sorghum	mitochondrion	76.28	75.07
KRH45977	Soybean	plastid	73.58	74.18
KRG99028	Soybean	plastid	73.32	73.91
CDY15588	Canola	plastid	73.05	71.88
Bra030661.1-P	Field mustard	plastid	72.78	71.62
AT1G06690.1	Thale cress	plastid	72.78	71.62
CDX86514	Canola	plastid	72.78	71.62
Zm00001d003086_P001	Maize	plastid	71.43	70.86
Os07t0142900-01	Rice	plastid	70.89	69.95
KXG26676	Sorghum	mitochondrion, plastid	71.7	69.82
TraesCS2D01G254700.1	Wheat	cytosol, mitochondrion	69.0	68.45
TraesCS2B01G267900.1	Wheat	mitochondrion	68.73	68.18
TraesCS2A01G254200.1	Wheat	mitochondrion	68.73	68.18
HORVU2Hr1G060730.2	Barley	cytosol, mitochondrion	69.27	67.99
Zm00001d007858_P001	Maize	plastid	74.66	67.4
GSMUA_Achr3P18270_001	Banana	plastid	37.47	36.77
GSMUA_Achr9P10640_001	Banana	cytosol	27.49	29.23
GSMUA_Achr5P16000_001	Banana	cytosol, nucleus, plastid	11.86	29.14
GSMUA_Achr5P16010_001	Banana	cytosol	8.63	27.35
GSMUA_Achr8P26850_001	Banana	mitochondrion	25.07	26.57
GSMUA_Achr5P16020_001	Banana	cytosol	27.22	25.57
GSMUA_Achr8P20540_001	Banana	cytosol	14.82	24.12
GSMUA_Achr2P02520_001	Banana	extracellular, plasma membrane	21.83	22.69
GSMUA_Achr3P27400_001	Banana	mitochondrion	16.98	20.79
GSMUA_Achr9P23530_001	Banana	mitochondrion	16.71	20.46
GSMUA_Achr5P03020_001	Banana	cytosol	4.31	18.6
GSMUA_Achr4P04780_001	Banana	plastid	21.02	18.44

Protein Annotations

Gene3D:3.20.20.100	MapMan:35.1	InterPro:Aldo/ket_reductase_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009941	GO:GO:0010287	GO:GO:0016020
GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr4G31780_001	EnsemblPlants:GSMUA_Achr4P31780_001	EnsemblPlants:GSMUA_Achr4T31780_001	InterPro:IPR036812
UniProt:M0STU0	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	ScanProsite:PS00062	PANTHER:PTHR43625
PANTHER:PTHR43625:SF20	SUPFAM:SSF51430	UniParc:UPI0002962FF9	:	:	:

Description

Uncharacterized oxidoreductase At1g06690, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr4G31780_001]

Coordinates

chr4:-:28843244..28846609

Molecular Weight (calculated)

40671.6 Da

IEP (calculated)

8.885

GRAVY (calculated)

-0.232

Length

371 amino acids

Sequence
(BLAST)

001: MALQVNGAGF SLLRWRRGGA LRTRAVASES VATTREEVEK VKLGGSDLKV TKLGIGAWSW GDTTYWNDFQ WDDRKLKAAK AAFDTSIDGG ITFFDTAEVY
101: GAGVMGAVNS ETLLGRFIKE RQQKEAVEVA VATKFAALPW RLGRGSVLSA LKDSLSRLGV SSVELYQLHW PGIWGNKGYI DGLGDAVEQG LVKAVGVSNY
201: SERRLRDAYN QLKKRGIPLA SNQVNYSLIY RIPEENGVKA TCDELGITLI AYSPIAQGMI QSSALTGKYT PENPPTGHRG RIYTPDCLQL QPLVTRIEEV
301: GQNYRKTPTQ VVLNWLIAQD NVVPIPGAKN AEQATQFAGA LGWRLTEQEI EELRALASEI NPVIGFPVEK L

Best Arabidopsis Sequence Match ( AT1G06690.1 )
(BLAST)

001: MAMATHFTFP FNYVVSEGSH GRRSFVRKLV RAVASGDSVA PAISEESKVK LGGSDLKVTK LGIGVWSWGD NSYWNDFQWD DRKLKAAKGA FDTSLDNGID
101: FFDTAEVYGS KFSLGAISSE TLLGRFIRER KERYPGAEVS VATKFAALPW RFGRESVVTA LKDSLSRLEL SSVDLYQLHW PGLWGNEGYL DGLGDAVEQG
201: LVKAVGVSNY SEKRLRDAYE RLKKRGIPLA SNQVNYSLIY RAPEQTGVKA ACDELGVTLI AYSPIAQGAL TGKYTPENPP SGPRGRIYTR EFLTKLQPLL
301: NRIKQIGENY SKTPTQIALN WLVAQGNVIP IPGAKNAEQA KEFAGAIGWS LTDNEVSELR SLASEIKPVV GFPVEYL

Arabidopsis Description

Uncharacterized oxidoreductase At1g06690, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94A68]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.