Factsheet for GSMUA_Achr8P26850_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
vacuole 1
mitochondrion 4
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35444	Soybean	cytosol	63.43	64.53
VIT_05s0020g04130.t01	Wine grape	cytosol	63.43	64.35
Solyc09g082720.2.1	Tomato	cytosol, plastid	63.14	64.06
GSMUA_Achr9P10640_001	Banana	cytosol	63.14	63.32
KRH35448	Soybean	nucleus	62.86	63.22
PGSC0003DMT400016488	Potato	mitochondrion	43.14	62.66
Solyc09g082730.2.1	Tomato	cytosol	61.71	62.43
PGSC0003DMT400016484	Potato	cytosol	60.57	60.92
GSMUA_Achr5P16010_001	Banana	cytosol	17.43	52.14
GSMUA_Achr5P16000_001	Banana	cytosol, nucleus, plastid	21.14	49.01
GSMUA_Achr5P16020_001	Banana	cytosol	54.29	48.1
GSMUA_Achr8P20540_001	Banana	cytosol	30.86	47.37
GSMUA_Achr5P03020_001	Banana	cytosol	11.14	45.35
GSMUA_Achr2P02520_001	Banana	extracellular, plasma membrane	26.0	25.49
GSMUA_Achr4P31780_001	Banana	mitochondrion	26.57	25.07
GSMUA_Achr3P18270_001	Banana	plastid	26.0	24.07
GSMUA_Achr3P27400_001	Banana	mitochondrion	20.29	23.43
GSMUA_Achr9P23530_001	Banana	mitochondrion	19.71	22.77
GSMUA_Achr4P04780_001	Banana	plastid	25.71	21.28

Protein Annotations

EnsemblPlants:GSMUA_Achr8P26850_001	EnsemblPlants:GSMUA_Achr8T26850_001	EnsemblPlantsGene:GSMUA_Achr8G26850_001	Gene3D:3.20.20.100	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Aldo/keto_reductase	InterPro:IPR036812
InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PANTHER:PTHR43625	PANTHER:PTHR43625:SF10	PFAM:PF00248	PRINTS:PR00069
SUPFAM:SSF51430	UniParc:UPI00029516C3	UniProt:M0TTY8	MapMan:50.1.1	:	:

Description

Auxin-induced protein PCNT115 [Source:GMGC_GENE;Acc:GSMUA_Achr8G26850_001]

Coordinates

chr8:-:30226750..30229289

Molecular Weight (calculated)

38463.0 Da

IEP (calculated)

5.593

GRAVY (calculated)

-0.227

Length

350 amino acids

Sequence
(BLAST)

001: MEQKAQQRTR VPKVKLGTQG LEVSKLGFGC SGLSGIFNDP LSYEEGAAIV IDAFHNGVTF FDTSDAYGNG HNENLIGQAL KHLPREKVQI ASKFGIAGFE
101: DGRLLINGLP EYARKCCEGS LQRLGVDYID LYFPHRVDTT VPIEHTMHEL KKLVEEGKIK YIGLCEASPD TIRRAHAVHP ISAVQMEWSL WTRDIEDEII
201: PLCRELGIGV IAYSPLGHGF FAGRAGTEGL PEGSIVALNP RFNGENADKN KKLFVRVTKL AEKHGCTPPQ LALAWVLHQG EDVVPIPGTT KVKHLDANIA
301: SLDVKLSEEE LKEVSDAMPV DEIGGERDIE LFTSCSWKFA NTPLPATPLE

Best Arabidopsis Sequence Match ( AT1G60690.1 )
(BLAST)

001: MAESCRVRRI KLGSQGLEVS AQGLGCMGLT GHYGASKPET EAIALIHHAI HSGVTFLDTS DMYGPETNEI LLGKALKDGV REKVELATKF GISYAEGNRE
101: IKGDPAYVRA ACEASLKRLD VTCIDLYYQH RIDTRVPIEI TMGELKKLIE EGKIKYIGLS EASASTIRRA HTVHPITAVQ LEWSLWTRDV EEEIVPTCRE
201: LGIGIVSYSP LGRGFFASGP KLVENLDNND FRKALPRFQQ ENLDHNKILY EKVSAMSEKK GCTPAQLALA WVHHQGDDVC PIPGTTKIEN LNQNIRALSV
301: KLTPEEMSEL ETIAQPESVK GERYMATVPT FKNSDTPPLS SWNAV

Arabidopsis Description

Probable aldo-keto reductase 3 [Source:UniProtKB/Swiss-Prot;Acc:O22707]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.