Factsheet for GSMUA_Achr2P02520_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0645200-01	Rice	extracellular	70.03	73.75
TraesCS3D01G080800.1	Wheat	cytosol	73.95	73.54
TraesCS3A01G080900.1	Wheat	cytosol	73.11	72.7
Zm00001d031970_P001	Maize	cytosol	45.1	72.2
HORVU3Hr1G014470.2	Barley	cytosol	72.55	72.14
VIT_07s0104g01010.t01	Wine grape	cytosol, extracellular, nucleus, plastid	36.69	71.58
TraesCS3B01G095500.1	Wheat	cytosol	49.02	70.56
HORVU3Hr1G014430.1	Barley	cytosol	66.11	70.24
KRH59094	Soybean	extracellular, peroxisome, plastid	70.31	70.11
Zm00001d043967_P001	Maize	extracellular	23.53	70.0
Solyc09g074310.2.1	Tomato	endoplasmic reticulum, extracellular	69.75	69.36
PGSC0003DMT400043415	Potato	endoplasmic reticulum, extracellular	69.47	69.08
KRH42967	Soybean	extracellular	68.91	68.72
OQU80724	Sorghum	cytosol, endoplasmic reticulum, peroxisome	72.55	44.73
GSMUA_Achr4P04780_001	Banana	plastid	47.9	40.43
GSMUA_Achr5P16010_001	Banana	cytosol	10.08	30.77
GSMUA_Achr5P16000_001	Banana	cytosol, nucleus, plastid	11.76	27.81
GSMUA_Achr9P10640_001	Banana	cytosol	25.77	26.36
GSMUA_Achr9P23530_001	Banana	mitochondrion	22.13	26.07
GSMUA_Achr8P26850_001	Banana	mitochondrion	25.49	26.0
GSMUA_Achr3P27400_001	Banana	mitochondrion	21.85	25.74
GSMUA_Achr5P16020_001	Banana	cytosol	25.49	23.04
GSMUA_Achr4P31780_001	Banana	mitochondrion	22.69	21.83
GSMUA_Achr5P03020_001	Banana	cytosol	5.04	20.93
GSMUA_Achr3P18270_001	Banana	plastid	22.13	20.9
GSMUA_Achr8P20540_001	Banana	cytosol	10.36	16.23

Protein Annotations

EnsemblPlants:GSMUA_Achr2P02520_001	EnsemblPlants:GSMUA_Achr2T02520_001	EnsemblPlantsGene:GSMUA_Achr2G02520_001	Gene3D:3.20.20.100	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	PANTHER:PTHR43147	PANTHER:PTHR43147:SF2	PFAM:PF00248	SUPFAM:SSF51430	UniParc:UPI0002956B64
UniProt:M0S4J3	MapMan:35.1	:	:	:	:

Description

Putative Protein tas [Source:GMGC_GENE;Acc:GSMUA_Achr2G02520_001]

Coordinates

chr2:+:8338342..8343759

Molecular Weight (calculated)

39744.7 Da

IEP (calculated)

6.621

GRAVY (calculated)

-0.137

Length

357 amino acids

Sequence
(BLAST)

001: MAVPMFLLAP DLSVSRLCFG TMTLGEQNTV PQSFRLLDAA FEAGINFLDS AEMYPVPQRR ETQGRSEEYI GRWMRARNVP RDRIVLATKV TGPSGQMTWI
101: RGGPKSLDAN NILEAINDSL LRLSTDYIDL YQIHWPDRYV PMFGETDYDP RQQYGSVAIE EQLDALGKAV DSGKIRYIGL SNETPYGVMK FLHISNYIQS
201: SPKIITVQNS YNLLCRNFDC GLAECCHHES ISLLAYSPMA MGILSGKYFS AGGGPSDARM NLFQGRYSEG ESRYNLSNVT LKAAVEDYIN IARKFGLSPA
301: SLAIAFVLIH PLVASAVFGA TKVWQLREVV EACNVHLSSE MTAEINKVHA RYPNPCP

Best Arabidopsis Sequence Match ( AT1G04420.1 )
(BLAST)

001: MASSYVTYST VTPVVSSSNI RGVFRLAFTR RRVTLSPNAR RRILRVSAKA STKNAMEYRK LGDSDLNISE VTMGTMTFGE QNTEKESHEM LSYAIEEGIN
101: CIDTAEAYPI PMKKETQGKT DLYISSWLKS QQRDKIVLAT KVCGYSERSA YIRDSGEILR VDAANIKESV EKSLKRLGTD YIDLLQIHWP DRYVPLFGDF
201: YYETSKWRPS VPFAEQLRAF QDLIVEGKVR YIGVSNETSY GVTEFVNTAK LEGLPKIVSI QNGYSLLVRC RYEVDLVEVC HPKNCNVGLL AYSPLGGGSL
301: SGKYLATDQE ATKNARLNLF PGYMERYKGS LAKEATIQYV EVAKKYGLTP VELALGFVRD RPFVTSTIIG ATSVKQLKED IDAFLMTERP FSQEVMADID
401: AVFKRFKDPS FV

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ23]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.