Factsheet for PGSC0003DMT400043415

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 3
plasma membrane 3
golgi 3
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g074310.2.1	Tomato	endoplasmic reticulum, extracellular	96.94	96.94
KRH59094	Soybean	extracellular, peroxisome, plastid	73.82	74.02
KRH42967	Soybean	extracellular	73.54	73.74
VIT_07s0104g01010.t01	Wine grape	cytosol, extracellular, nucleus, plastid	36.77	72.13
GSMUA_Achr2P02520_001	Banana	extracellular, plasma membrane	69.08	69.47
Zm00001d043967_P001	Maize	extracellular	23.12	69.17
TraesCS3D01G080800.1	Wheat	cytosol	68.8	68.8
TraesCS3A01G080900.1	Wheat	cytosol	68.8	68.8
Zm00001d031970_P001	Maize	cytosol	42.62	68.61
TraesCS3B01G095500.1	Wheat	cytosol	47.35	68.55
HORVU3Hr1G014470.2	Barley	cytosol	66.85	66.85
Os11t0645200-01	Rice	extracellular	62.4	66.08
HORVU3Hr1G014430.1	Barley	cytosol	60.72	64.88
OQU80724	Sorghum	cytosol, endoplasmic reticulum, peroxisome	68.52	42.49
PGSC0003DMT400042008	Potato	cytosol, plastid	44.85	40.25
PGSC0003DMT400043456	Potato	cytosol, mitochondrion	29.8	32.42
PGSC0003DMT400016479	Potato	cytosol	5.57	32.26
PGSC0003DMT400016819	Potato	cytosol	15.6	28.28
PGSC0003DMT400016488	Potato	mitochondrion	17.83	26.56
PGSC0003DMT400016484	Potato	cytosol	25.35	26.15
PGSC0003DMT400006010	Potato	cytosol	24.23	25.22
PGSC0003DMT400041157	Potato	plastid	23.68	23.16
PGSC0003DMT400047623	Potato	plastid	23.4	22.7
PGSC0003DMT400016815	Potato	extracellular	7.24	20.97
PGSC0003DMT400042838	Potato	cytosol	19.22	15.37

Protein Annotations

EnsemblPlants:PGSC0003DMT400043415	EnsemblPlantsGene:PGSC0003DMG400016854	Gene3D:3.20.20.100	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf
PANTHER:PTHR43147	PANTHER:PTHR43147:SF2	PFAM:PF00248	PGSC:PGSC0003DMG400016854	SUPFAM:SSF51430	UniParc:UPI000296D60E
UniProt:M1BEL0	MapMan:35.1	:	:	:	:

Description

Oxidoreductase, aldo/keto reductase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400016854]

Coordinates

chr9:+:51535654..51539921

Molecular Weight (calculated)

40484.4 Da

IEP (calculated)

6.402

GRAVY (calculated)

-0.191

Length

359 amino acids

Sequence
(BLAST)

001: MAFAVPLFNL APDLTVSRLC LGTMTFGEQN TLAESFQLLD KAFNSGINFF DSAEMYPVPQ RAETHGRSEE YFGRWIRERK VTRDSVVFAT KVSGPSGQMT
101: WIRNGPESLD AQNITEAIDN SLLRVKTDYI DLYQIHWPDR YVPMFGETDY DPLRHYTPVC FEEQLDALER AVDAGKIRYI GLSNETPYGI MKFQQVAKSR
201: AGNLQIVSVQ NAYNLLCRNF DLAMAECCHN ERISLLAYSP LAMGILSGKY FAEDGGPPNA RLNLFKGRYK EGESRYDLSK SNVLYAAKSY LEIADRYGIH
301: PVSLAIAFIM RHPLVASVVF GATKVWQLEE VLAACKVNLS PEIITEINKV HSRFPSPCP

Best Arabidopsis Sequence Match ( AT1G04420.1 )
(BLAST)

001: MASSYVTYST VTPVVSSSNI RGVFRLAFTR RRVTLSPNAR RRILRVSAKA STKNAMEYRK LGDSDLNISE VTMGTMTFGE QNTEKESHEM LSYAIEEGIN
101: CIDTAEAYPI PMKKETQGKT DLYISSWLKS QQRDKIVLAT KVCGYSERSA YIRDSGEILR VDAANIKESV EKSLKRLGTD YIDLLQIHWP DRYVPLFGDF
201: YYETSKWRPS VPFAEQLRAF QDLIVEGKVR YIGVSNETSY GVTEFVNTAK LEGLPKIVSI QNGYSLLVRC RYEVDLVEVC HPKNCNVGLL AYSPLGGGSL
301: SGKYLATDQE ATKNARLNLF PGYMERYKGS LAKEATIQYV EVAKKYGLTP VELALGFVRD RPFVTSTIIG ATSVKQLKED IDAFLMTERP FSQEVMADID
401: AVFKRFKDPS FV

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ23]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.