Factsheet for TraesCS3A01G080900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G080800.1	Wheat	cytosol	97.49	97.49
TraesCS3B01G095500.1	Wheat	cytosol	66.3	95.97
HORVU3Hr1G014470.2	Barley	cytosol	93.87	93.87
HORVU3Hr1G014430.1	Barley	cytosol	84.12	89.88
Os11t0645200-01	Rice	extracellular	79.94	84.66
Zm00001d031970_P001	Maize	cytosol	50.7	81.61
Zm00001d043967_P001	Maize	extracellular	26.46	79.17
GSMUA_Achr2P02520_001	Banana	extracellular, plasma membrane	72.7	73.11
PGSC0003DMT400043415	Potato	endoplasmic reticulum, extracellular	68.8	68.8
Solyc09g074310.2.1	Tomato	endoplasmic reticulum, extracellular	68.25	68.25
KRH59094	Soybean	extracellular, peroxisome, plastid	67.41	67.6
KRH42967	Soybean	extracellular	66.57	66.76
VIT_07s0104g01010.t01	Wine grape	cytosol, extracellular, nucleus, plastid	33.15	65.03
OQU80724	Sorghum	cytosol, endoplasmic reticulum, peroxisome	84.68	52.5
TraesCS4A01G235500.1	Wheat	plastid	44.29	39.26
TraesCS4A01G235300.1	Wheat	plastid	43.18	38.75
TraesCS4A01G349500.1	Wheat	cytosol	18.38	33.0
TraesCS7A01G195600.1	Wheat	cytosol	28.41	29.91
TraesCS5A01G331200.1	Wheat	cytosol	18.94	29.44
TraesCS2A01G274700.1	Wheat	cytosol, mitochondrion, peroxisome	28.13	29.19
TraesCS2A01G274800.1	Wheat	cytosol	27.86	28.82
TraesCS2A01G326100.1	Wheat	mitochondrion	27.58	28.53
TraesCS7A01G184900.1	Wheat	cytosol	26.46	27.94
TraesCS2A01G325800.2	Wheat	cytosol, mitochondrion	26.74	27.04
TraesCS3A01G222900.1	Wheat	cytosol, golgi, nucleus	25.63	26.98
TraesCS7A01G185000.1	Wheat	cytosol	25.35	26.3
TraesCS6A01G392700.1	Wheat	golgi	27.3	25.86
TraesCS2A01G254200.1	Wheat	mitochondrion	24.79	23.8
TraesCS2A01G254100.1	Wheat	mitochondrion, plastid	24.51	23.72
TraesCS1A01G180800.1	Wheat	plastid	21.17	20.27

Protein Annotations

EnsemblPlants:TraesCS3A01G080900.1	EnsemblPlantsGene:TraesCS3A01G080900	Gene3D:3.20.20.100	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf
PANTHER:PTHR43147	PANTHER:PTHR43147:SF2	PFAM:PF00248	SUPFAM:SSF51430	TIGR:cd06660	MapMan:35.1

Description

No Description!

Coordinates

chr3A:-:52418870..52421057

Molecular Weight (calculated)

40181.4 Da

IEP (calculated)

6.996

GRAVY (calculated)

-0.245

Length

359 amino acids

Sequence
(BLAST)

001: MAMPTFHLAP DLPPVSRLCL GTMTMGEQSG PPESLRLLDA AFDAGVNFFD SAEMYPVPQR AETHGRSEEL VGRWLRARRV PRDSVVLATK VAGPSGQMTW
101: IRGGPVALDS RNITEAIDTS LRRLGVDYID LYQIHWPDRY VPMFGETDYD PSRQYASIPM EEQLEALGKG VEAGKIRYIG LSNETAYGLM KFLQLSRDFQ
201: LRSKILTVQN SYNLLCRNFD AGLAECCHHE RISLLAYSPM AMGILSGKYH SSDDSGPPDA RMNLFKGRYS EGESRYNLQN PKLESAVKEY RRIGVKYGIL
301: PSILAVAFVL RHPLVGSAVF GATKLWQLKE VLQATRVHLC EEILAEINDV HARFPDPCP

Best Arabidopsis Sequence Match ( AT1G04420.1 )
(BLAST)

001: MASSYVTYST VTPVVSSSNI RGVFRLAFTR RRVTLSPNAR RRILRVSAKA STKNAMEYRK LGDSDLNISE VTMGTMTFGE QNTEKESHEM LSYAIEEGIN
101: CIDTAEAYPI PMKKETQGKT DLYISSWLKS QQRDKIVLAT KVCGYSERSA YIRDSGEILR VDAANIKESV EKSLKRLGTD YIDLLQIHWP DRYVPLFGDF
201: YYETSKWRPS VPFAEQLRAF QDLIVEGKVR YIGVSNETSY GVTEFVNTAK LEGLPKIVSI QNGYSLLVRC RYEVDLVEVC HPKNCNVGLL AYSPLGGGSL
301: SGKYLATDQE ATKNARLNLF PGYMERYKGS LAKEATIQYV EVAKKYGLTP VELALGFVRD RPFVTSTIIG ATSVKQLKED IDAFLMTERP FSQEVMADID
401: AVFKRFKDPS FV

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ23]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.