Factsheet for PGSC0003DMT400043456

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
plasma membrane 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g098150.1.1	Tomato	plastid	99.7	99.7
VIT_05s0051g00650.t01	Wine grape	mitochondrion	91.82	92.38
KRH33472	Soybean	nucleus	90.3	90.85
KRG90245	Soybean	nucleus	90.3	90.85
CDY15518	Canola	mitochondrion	86.36	86.89
Bra030584.1-P	Field mustard	mitochondrion	86.06	86.59
CDX86614	Canola	mitochondrion	86.06	86.59
CDY18250	Canola	cytosol	86.06	86.59
Bra015342.1-P	Field mustard	cytosol	85.76	86.28
CDX89797	Canola	cytosol, mitochondrion, plastid	85.76	86.28
AT1G04690.1	Thale cress	cytosol	85.76	86.28
GSMUA_Achr9P23530_001	Banana	mitochondrion	78.48	85.48
Os02t0817500-01	Rice	mitochondrion	84.55	85.06
Zm00001d018485_P002	Maize	mitochondrion	84.24	84.76
GSMUA_Achr3P27400_001	Banana	mitochondrion	77.58	84.49
EES06018	Sorghum	mitochondrion	83.94	84.45
TraesCS6D01G378400.1	Wheat	plastid	83.94	84.45
HORVU6Hr1G091250.1	Barley	mitochondrion	83.64	84.15
TraesCS6B01G432900.1	Wheat	mitochondrion	83.03	83.54
Zm00001d051912_P001	Maize	mitochondrion	82.73	82.98
TraesCS6A01G392700.1	Wheat	golgi	83.33	72.56
CDY18564	Canola	extracellular, plasma membrane	35.45	32.23
PGSC0003DMT400043415	Potato	endoplasmic reticulum, extracellular	32.42	29.8
PGSC0003DMT400016819	Potato	cytosol	15.15	25.25
PGSC0003DMT400006010	Potato	cytosol	26.36	25.22
PGSC0003DMT400042008	Potato	cytosol, plastid	30.3	25.0
PGSC0003DMT400016484	Potato	cytosol	26.36	25.0
PGSC0003DMT400016488	Potato	mitochondrion	17.88	24.48
PGSC0003DMT400041157	Potato	plastid	24.24	21.8
PGSC0003DMT400016815	Potato	extracellular	8.18	21.77
PGSC0003DMT400047623	Potato	plastid	24.24	21.62
PGSC0003DMT400016479	Potato	cytosol	3.94	20.97
PGSC0003DMT400042838	Potato	cytosol	18.18	13.36
Bra017398.1-P	Field mustard	extracellular	5.15	12.88

Protein Annotations

EMBL:AJ000999	EnsemblPlants:PGSC0003DMT400043456	EnsemblPlantsGene:PGSC0003DMG400016870	Gene3D:3.20.20.100	InterPro:IPR036812	InterPro:K_chnl_volt-dep_bsu_KCNAB-rel
InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PANTHER:PTHR43150	PFAM:PF00248	PGSC:PGSC0003DMG400016870	PRINTS:PR01577
ProteinID:CAA04451	ProteinID:CAA04451.1	SUPFAM:SSF51430	UniParc:UPI000296C167	UniProt:M1BEN2	MapMan:35.1

Description

Beta-subunit of K+ channels [Source:PGSC_GENE;Acc:PGSC0003DMG400016870]

Coordinates

chr12:+:58983107..58988298

Molecular Weight (calculated)

36974.2 Da

IEP (calculated)

7.928

GRAVY (calculated)

-0.334

Length

330 amino acids

Sequence
(BLAST)

001: MQMQYKNLGR SGLKVSQLSY GAWVTFGNQL DVKEAKTLLQ CCRDHGVNFF DNAEVYANGR AEEIMGQAIR ELGWKRSDIV VSTKIFWGGS GPNDKGLSRK
101: HIIEGTKASL KRLDMDYVDL IYCHRPDTST PIEETVRAMN YVIDKGWAFY WGTSEWSAQQ ITEAWGVAQR LDLVGPIVEQ PEYNLLSRHK VESEYLPLYS
201: NYGIGLTTWS PLASGVLTGK YTSGNIPPDS RFSLENYKNL ASRSLVDDVL RKVNGLKPIA EELGVPLPQL AIAWCAANPN VSSVITGATK EYQIQENMKA
301: INVIPMLTPA VMEKIEAIVQ SKPKRQDSYR

Best Arabidopsis Sequence Match ( AT1G04690.1 )
(BLAST)

001: MQYKNLGKSG LKVSTLSFGA WVTFGNQLDV KEAKSILQCC RDHGVNFFDN AEVYANGRAE EIMGQAIREL GWRRSDIVIS TKIFWGGPGP NDKGLSRKHI
101: VEGTKASLKR LDMDYVDVLY CHRPDASTPI EETVRAMNYV IDKGWAFYWG TSEWSAQQIT EAWGAADRLD LVGPIVEQPE YNMFARHKVE TEFLPLYTNH
201: GIGLTTWSPL ASGVLTGKYN KGAIPSDSRF ALENYKNLAN RSLVDDVLRK VSGLKPIADE LGVTLAQLAI AWCASNPNVS SVITGATRES QIQENMKAVD
301: VIPLLTPIVL DKIEQVIQSK PKRPESYR

Arabidopsis Description

KAB1Probable voltage-gated potassium channel subunit beta [Source:UniProtKB/Swiss-Prot;Acc:O23016]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.