CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
plasma membrane 1
mitochondrion 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

nucleus: 27291164

msms PMID: 27291164 doi

X Yin, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33472	Soybean	nucleus	98.78	98.78
VIT_05s0051g00650.t01	Wine grape	mitochondrion	92.07	92.07
Solyc12g098150.1.1	Tomato	plastid	91.16	90.61
PGSC0003DMT400043456	Potato	cytosol, mitochondrion	90.85	90.3
Bra030584.1-P	Field mustard	mitochondrion	88.72	88.72
CDX86614	Canola	mitochondrion	88.72	88.72
CDY15518	Canola	mitochondrion	88.41	88.41
CDY18250	Canola	cytosol	88.11	88.11
Bra015342.1-P	Field mustard	cytosol	87.8	87.8
AT1G04690.1	Thale cress	cytosol	87.8	87.8
CDX89797	Canola	cytosol, mitochondrion, plastid	87.8	87.8
Zm00001d018485_P002	Maize	mitochondrion	86.28	86.28
GSMUA_Achr3P27400_001	Banana	mitochondrion	79.57	86.14
Os02t0817500-01	Rice	mitochondrion	85.98	85.98
GSMUA_Achr9P23530_001	Banana	mitochondrion	79.27	85.81
Zm00001d051912_P001	Maize	mitochondrion	85.37	85.11
TraesCS6B01G432900.1	Wheat	mitochondrion	85.06	85.06
TraesCS6D01G378400.1	Wheat	plastid	85.06	85.06
EES06018	Sorghum	mitochondrion	85.06	85.06
HORVU6Hr1G091250.1	Barley	mitochondrion	84.76	84.76
TraesCS6A01G392700.1	Wheat	golgi	84.76	73.35
CDY18564	Canola	extracellular, plasma membrane	35.37	31.96
KRG96965	Soybean	cytosol	19.82	26.97
KRH42967	Soybean	extracellular	28.96	26.54
KRH59094	Soybean	extracellular, peroxisome, plastid	28.96	26.54
KRG97174	Soybean	cytosol	10.06	26.4
KRG94635	Soybean	cytosol	20.43	26.27
KRH34080	Soybean	cytosol	26.52	25.66
KRH68755	Soybean	cytosol	19.51	25.4
KRH45230	Soybean	nucleus	26.22	25.15
KRH55516	Soybean	cytosol	25.91	24.71
KRH55515	Soybean	cytosol	25.61	24.49
KRH68728	Soybean	cytosol, nucleus	25.0	24.19
KRH35448	Soybean	nucleus	25.61	24.14
KRH35444	Soybean	cytosol	25.3	24.13
KRH68760	Soybean	cytosol	21.34	23.33
KRH68757	Soybean	cytosol, golgi, nucleus	24.39	23.12
KRH69116	Soybean	plastid	28.35	22.09
KRH53587	Soybean	plastid	23.17	21.05
KRH68759	Soybean	nucleus	25.91	20.63
KRG99028	Soybean	plastid	22.87	20.38
KRH45977	Soybean	plastid	22.87	20.38
KRH07938	Soybean	cytosol, extracellular, plastid	5.49	16.98
KRG94634	Soybean	cytosol	3.35	16.67
Bra017398.1-P	Field mustard	extracellular	5.49	13.64

Protein Annotations

EMBL:ACUP02012571	EnsemblPlants:KRG90245	EnsemblPlantsGene:GLYMA_20G077200	EntrezGene:100807722	Gene3D:3.20.20.100	InterPro:IPR036812
InterPro:K_chnl_volt-dep_bsu_KCNAB-rel	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PANTHER:PTHR43150	PANTHER:PTHR43150:SF2	PFAM:PF00248
PRINTS:PR01577	ProteinID:KRG90245	ProteinID:KRG90245.1	SUPFAM:SSF51430	UniParc:UPI000233D99E	UniProt:I1NEH6
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:27862698..27867701

Molecular Weight (calculated)

36619.8 Da

IEP (calculated)

7.873

GRAVY (calculated)

-0.295

Length

328 amino acids

Sequence
(BLAST)

001: MQYKNLGRSG LKVSQLSYGA WVSFGNQLDV KEAKALLQCC RDHGVNFFDN AEVYANGRAE EIMGQAIREL GWKRSDIVVS TKIFWGGQGP NDKGLSRKHV
101: VEGTKASLKR LEMEYVDVLY CHRPDTSTPI EETVRAMNHV IDRGWAFYWG TSEWSAQQIT EAWAVAQRLD LVGPIVEQPE YNLLSRHKVE SEFLPLYTNY
201: GTGLTTWSPL ASGVLTGKYK KGVIPPDSRF ALENYKNLAS RSLVDDVLRK VDGLKPIADE LGVPLSQLAI AWCAANPNVS SVICGATKES QIQENMKAID
301: VIPLLTPVVM EKIEAVVQSK PKRPESYR

Best Arabidopsis Sequence Match ( AT1G04690.1 )
(BLAST)

001: MQYKNLGKSG LKVSTLSFGA WVTFGNQLDV KEAKSILQCC RDHGVNFFDN AEVYANGRAE EIMGQAIREL GWRRSDIVIS TKIFWGGPGP NDKGLSRKHI
101: VEGTKASLKR LDMDYVDVLY CHRPDASTPI EETVRAMNYV IDKGWAFYWG TSEWSAQQIT EAWGAADRLD LVGPIVEQPE YNMFARHKVE TEFLPLYTNH
201: GIGLTTWSPL ASGVLTGKYN KGAIPSDSRF ALENYKNLAN RSLVDDVLRK VSGLKPIADE LGVTLAQLAI AWCASNPNVS SVITGATRES QIQENMKAVD
301: VIPLLTPIVL DKIEQVIQSK PKRPESYR

Arabidopsis Description

KAB1Probable voltage-gated potassium channel subunit beta [Source:UniProtKB/Swiss-Prot;Acc:O23016]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.