Factsheet for GSMUA_Achr3P27400_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
plasma membrane 1
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P23530_001	Banana	mitochondrion	91.42	91.42
VIT_05s0051g00650.t01	Wine grape	mitochondrion	86.47	79.88
KRG90245	Soybean	nucleus	86.14	79.57
KRH33472	Soybean	nucleus	85.81	79.27
Zm00001d018485_P002	Maize	mitochondrion	85.81	79.27
EES06018	Sorghum	mitochondrion	85.48	78.96
TraesCS6D01G378400.1	Wheat	plastid	85.15	78.66
Os02t0817500-01	Rice	mitochondrion	84.82	78.35
HORVU6Hr1G091250.1	Barley	mitochondrion	84.82	78.35
TraesCS6B01G432900.1	Wheat	mitochondrion	84.49	78.05
Solyc12g098150.1.1	Tomato	plastid	84.82	77.88
Zm00001d051912_P001	Maize	mitochondrion	84.49	77.81
PGSC0003DMT400043456	Potato	cytosol, mitochondrion	84.49	77.58
CDY15518	Canola	mitochondrion	83.17	76.83
AT1G04690.1	Thale cress	cytosol	83.17	76.83
CDX86614	Canola	mitochondrion	82.84	76.52
Bra030584.1-P	Field mustard	mitochondrion	82.84	76.52
CDY18250	Canola	cytosol	82.51	76.22
Bra015342.1-P	Field mustard	cytosol	82.18	75.91
CDX89797	Canola	cytosol, mitochondrion, plastid	82.18	75.91
TraesCS6A01G392700.1	Wheat	golgi	84.49	67.55
CDY18564	Canola	extracellular, plasma membrane	30.69	25.62
GSMUA_Achr9P10640_001	Banana	cytosol	25.74	22.35
GSMUA_Achr2P02520_001	Banana	extracellular, plasma membrane	25.74	21.85
GSMUA_Achr8P26850_001	Banana	mitochondrion	23.43	20.29
GSMUA_Achr4P04780_001	Banana	plastid	28.05	20.09
GSMUA_Achr5P16000_001	Banana	cytosol, nucleus, plastid	9.57	19.21
GSMUA_Achr5P16010_001	Banana	cytosol	7.26	18.8
GSMUA_Achr5P16020_001	Banana	cytosol	23.76	18.23
GSMUA_Achr3P18270_001	Banana	plastid	22.11	17.72
GSMUA_Achr5P03020_001	Banana	cytosol	4.95	17.44
GSMUA_Achr4P31780_001	Banana	mitochondrion	20.79	16.98
GSMUA_Achr8P20540_001	Banana	cytosol	11.22	14.91
Bra017398.1-P	Field mustard	extracellular	5.28	12.12

Protein Annotations

EnsemblPlants:GSMUA_Achr3P27400_001	EnsemblPlants:GSMUA_Achr3T27400_001	EnsemblPlantsGene:GSMUA_Achr3G27400_001	Gene3D:3.20.20.100	InterPro:IPR036812	InterPro:K_chnl_volt-dep_bsu_KCNAB-rel
InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PANTHER:PTHR43150	PFAM:PF00248	PRINTS:PR01577	SUPFAM:SSF51430
UniParc:UPI000294E882	UniProt:M0SIA6	MapMan:35.1	:	:	:

Description

Probable voltage-gated potassium channel subunit beta [Source:GMGC_GENE;Acc:GSMUA_Achr3G27400_001]

Coordinates

chr3:-:26936311..26943674

Molecular Weight (calculated)

33802.4 Da

IEP (calculated)

8.301

GRAVY (calculated)

-0.294

Length

303 amino acids

Sequence
(BLAST)

001: MQYNNLGRSG LKVSQLSYGA WVTFGNQIDV KEAKSLLQCC RDNGLGWRRS DLVISTKIFW GGPGPNDKGL SRKHLIEGTR ASLRRLDMDY VDVLFCHRPD
101: AATPIEETVR AMNHIIDRGW AFYWGTSEWS AQQITEAWAV AHRLDLVGPI VEQPEYNLLS RHKVEVEFLP LYSTYGLGLT TWSPLASGVL TGKYNKGNIP
201: PDSRFALDNY KNLASRSLVD DTLRKVNGLK PIADELGVPL SQLAIAWCAS NPHVSTVITG ATKESQIVEN IQALEVIPKL TPDVIEKIEA AVQSKPKRPE
301: SYR

Best Arabidopsis Sequence Match ( AT1G04690.1 )
(BLAST)

001: MQYKNLGKSG LKVSTLSFGA WVTFGNQLDV KEAKSILQCC RDHGVNFFDN AEVYANGRAE EIMGQAIREL GWRRSDIVIS TKIFWGGPGP NDKGLSRKHI
101: VEGTKASLKR LDMDYVDVLY CHRPDASTPI EETVRAMNYV IDKGWAFYWG TSEWSAQQIT EAWGAADRLD LVGPIVEQPE YNMFARHKVE TEFLPLYTNH
201: GIGLTTWSPL ASGVLTGKYN KGAIPSDSRF ALENYKNLAN RSLVDDVLRK VSGLKPIADE LGVTLAQLAI AWCASNPNVS SVITGATRES QIQENMKAVD
301: VIPLLTPIVL DKIEQVIQSK PKRPESYR

Arabidopsis Description

KAB1Probable voltage-gated potassium channel subunit beta [Source:UniProtKB/Swiss-Prot;Acc:O23016]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.