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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 3
  • plasma membrane 1
  • mitochondrion 5
  • cytosol 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:plastid
EpiLoc:plasma membrane
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:cytosol, plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
 endoplasmic reticulum: 28499913
nucleus: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG90245 Soybean nucleus 98.78 98.78
VIT_05s0051g00650.t01 Wine grape mitochondrion 92.07 92.07
Solyc12g098150.1.1 Tomato plastid 91.16 90.61
PGSC0003DMT400043456 Potato cytosol, mitochondrion 90.85 90.3
Bra030584.1-P Field mustard mitochondrion 88.41 88.41
CDX86614 Canola mitochondrion 88.41 88.41
CDY18250 Canola cytosol 88.41 88.41
Bra015342.1-P Field mustard cytosol 88.11 88.11
CDY15518 Canola mitochondrion 88.11 88.11
CDX89797 Canola cytosol, mitochondrion, plastid 88.11 88.11
AT1G04690.1 Thale cress cytosol 87.5 87.5
Zm00001d018485_P002 Maize mitochondrion 86.28 86.28
Os02t0817500-01 Rice mitochondrion 85.98 85.98
GSMUA_Achr3P27400_001 Banana mitochondrion 79.27 85.81
GSMUA_Achr9P23530_001 Banana mitochondrion 78.96 85.48
TraesCS6D01G378400.1 Wheat plastid 85.06 85.06
TraesCS6B01G432900.1 Wheat mitochondrion 85.06 85.06
Zm00001d051912_P001 Maize mitochondrion 85.06 84.8
EES06018 Sorghum mitochondrion 84.76 84.76
HORVU6Hr1G091250.1 Barley mitochondrion 84.76 84.76
TraesCS6A01G392700.1 Wheat golgi 84.45 73.09
CDY18564 Canola extracellular, plasma membrane 35.37 31.96
KRG96965 Soybean cytosol 19.82 26.97
KRH42967 Soybean extracellular 28.96 26.54
KRH59094 Soybean extracellular, peroxisome, plastid 28.96 26.54
KRG97174 Soybean cytosol 10.06 26.4
KRG94635 Soybean cytosol 20.43 26.27
KRH34080 Soybean cytosol 26.83 25.96
KRH68755 Soybean cytosol 19.82 25.79
KRH45230 Soybean nucleus 26.22 25.15
KRH55516 Soybean cytosol 25.91 24.71
KRH55515 Soybean cytosol 25.61 24.49
KRH68728 Soybean cytosol, nucleus 25.3 24.48
KRH35448 Soybean nucleus 25.91 24.43
KRH35444 Soybean cytosol 25.61 24.42
KRH68760 Soybean cytosol 21.65 23.67
KRH68757 Soybean cytosol, golgi, nucleus 24.7 23.41
KRH69116 Soybean plastid 28.66 22.33
KRH53587 Soybean plastid 23.17 21.05
KRH68759 Soybean nucleus 26.22 20.87
KRH45977 Soybean plastid 23.17 20.65
KRG99028 Soybean plastid 23.17 20.65
KRH07938 Soybean cytosol, extracellular, plastid 5.49 16.98
KRG94634 Soybean cytosol 3.35 16.67
Bra017398.1-P Field mustard extracellular 5.18 12.88
Protein Annotations
EMBL:ACUP02006501EnsemblPlants:KRH33472EnsemblPlantsGene:GLYMA_10G124800EntrezGene:100781297Gene3D:3.20.20.100InterPro:IPR036812
InterPro:K_chnl_volt-dep_bsu_KCNAB-relInterPro:NADP_OxRdtase_domInterPro:NADP_OxRdtase_dom_sfPANTHER:PTHR43150PANTHER:PTHR43150:SF2PFAM:PF00248
PRINTS:PR01577ProteinID:KRH33472ProteinID:KRH33472.1SUPFAM:SSF51430UniParc:UPI000233C4CAUniProt:I1LAJ3
MapMan:35.1:::::
Description
hypothetical protein
Coordinates
chr10:-:32580232..32585565
Molecular Weight (calculated)
36577.8 Da
IEP (calculated)
7.872
GRAVY (calculated)
-0.293
Length
328 amino acids
Sequence
(BLAST)
001: MQYKNLGRSG LKVSQLSYGA WVSFGNQLDV KEAKALLQCC RDHGVNFFDN AEVYANGRAE EIMGQAIREL GWKRSDIVVS TKIFWGGQGP NDKGLSRKHV
101: VEGTKASLKR LDMEYVDVLY CHRPDSSTPI EETVRAMNHV IDRGWAFYWG TSEWSAQQIT EAWAVAQRLD LVGPIVEQPE YNLLSRHKVE SEFLPLYTNY
201: GTGLTTWSPL ASGVLTGKYK KGVIPPDSRF ALENYKNLAS RSLVDDVLKK VDGLKPIAEE LGVPLSQLAI AWCAANPNVS SVICGATKES QIQENMKAID
301: VIPLLTPVVM EKIEAVVQSK PKRPESYR
Best Arabidopsis Sequence Match ( AT1G04690.1 )
(BLAST)
001: MQYKNLGKSG LKVSTLSFGA WVTFGNQLDV KEAKSILQCC RDHGVNFFDN AEVYANGRAE EIMGQAIREL GWRRSDIVIS TKIFWGGPGP NDKGLSRKHI
101: VEGTKASLKR LDMDYVDVLY CHRPDASTPI EETVRAMNYV IDKGWAFYWG TSEWSAQQIT EAWGAADRLD LVGPIVEQPE YNMFARHKVE TEFLPLYTNH
201: GIGLTTWSPL ASGVLTGKYN KGAIPSDSRF ALENYKNLAN RSLVDDVLRK VSGLKPIADE LGVTLAQLAI AWCASNPNVS SVITGATRES QIQENMKAVD
301: VIPLLTPIVL DKIEQVIQSK PKRPESYR
Arabidopsis Description
KAB1Probable voltage-gated potassium channel subunit beta [Source:UniProtKB/Swiss-Prot;Acc:O23016]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.