CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89797	Canola	cytosol, mitochondrion, plastid	99.39	99.39
CDY15518	Canola	mitochondrion	98.78	98.78
CDX86614	Canola	mitochondrion	98.48	98.48
AT1G04690.1	Thale cress	cytosol	98.17	98.17
VIT_05s0051g00650.t01	Wine grape	mitochondrion	88.41	88.41
KRH33472	Soybean	nucleus	88.41	88.41
KRG90245	Soybean	nucleus	88.11	88.11
Solyc12g098150.1.1	Tomato	plastid	86.89	86.36
PGSC0003DMT400043456	Potato	cytosol, mitochondrion	86.59	86.06
EES06018	Sorghum	mitochondrion	85.67	85.67
Os02t0817500-01	Rice	mitochondrion	85.37	85.37
Zm00001d018485_P002	Maize	mitochondrion	85.06	85.06
TraesCS6D01G378400.1	Wheat	plastid	84.76	84.76
HORVU6Hr1G091250.1	Barley	mitochondrion	84.76	84.76
TraesCS6B01G432900.1	Wheat	mitochondrion	84.15	84.15
Zm00001d051912_P001	Maize	mitochondrion	84.15	83.89
GSMUA_Achr9P23530_001	Banana	mitochondrion	77.44	83.83
GSMUA_Achr3P27400_001	Banana	mitochondrion	76.22	82.51
TraesCS6A01G392700.1	Wheat	golgi	84.15	72.82
CDY18564	Canola	extracellular, plasma membrane	36.59	33.06
CDY70614	Canola	cytosol	24.09	23.44
CDY18231	Canola	cytosol	28.66	22.76
CDY14368	Canola	plastid	23.78	21.61
CDY20245	Canola	plastid	23.78	21.55
CDX86514	Canola	plastid	23.78	20.69
CDY34139	Canola	cytosol	15.85	20.55
CDX89825	Canola	plastid	28.66	20.52
CDY15588	Canola	plastid	23.48	20.42
CDY34675	Canola	cytosol	11.89	18.48

Protein Annotations

EnsemblPlants:CDY18250	EnsemblPlantsGene:GSBRNA2T00002780001	Gene3D:3.20.20.100	InterPro:IPR036812	InterPro:K_chnl_volt-dep_bsu_KCNAB-rel	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	PANTHER:PTHR43150	PANTHER:PTHR43150:SF2	PFAM:PF00248	PRINTS:PR01577	ProteinID:CDY18250
ProteinID:CDY18250.1	SUPFAM:SSF51430	UniParc:UPI0004EAB985	UniProt:A0A078FUX2	MapMan:35.1	:

Description

BnaC05g02730DBnaC05g02730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUX2]

Coordinates

chrLK032083:+:539656..541352

Molecular Weight (calculated)

36538.6 Da

IEP (calculated)

7.538

GRAVY (calculated)

-0.314

Length

328 amino acids

Sequence
(BLAST)

001: MQYKNLGKSG LKVSTLSFGA WVTFGNQLDV KEAKSILQCC RDHGVNFFDN AEVYANGRAE EIMGQAIREL GWRRSDIVVS TKIFWGGPGP NDKGLSRKHI
101: VEGTKASLKR LDMDYVDVLY CHRPDASTPI EETVRAMNYV IDKGWAFYWG TSEWSAQQIT EAWGAAERLD LVGPIVEQPE YNMFARHKVE SEFLPLYTNH
201: GIGLTTWSPL ASGVLTGKYN KGSIPSDSRF ALENYKNLAN RSLVDDVLKK VSGLKPIADE LGVTLAQLAI AWCASNPNVS SVITGATRES QIQENMKAVD
301: VIPLLTPHVL DKIEQVIQSK PKRPESYR

Best Arabidopsis Sequence Match ( AT1G04690.1 )
(BLAST)

001: MQYKNLGKSG LKVSTLSFGA WVTFGNQLDV KEAKSILQCC RDHGVNFFDN AEVYANGRAE EIMGQAIREL GWRRSDIVIS TKIFWGGPGP NDKGLSRKHI
101: VEGTKASLKR LDMDYVDVLY CHRPDASTPI EETVRAMNYV IDKGWAFYWG TSEWSAQQIT EAWGAADRLD LVGPIVEQPE YNMFARHKVE TEFLPLYTNH
201: GIGLTTWSPL ASGVLTGKYN KGAIPSDSRF ALENYKNLAN RSLVDDVLRK VSGLKPIADE LGVTLAQLAI AWCASNPNVS SVITGATRES QIQENMKAVD
301: VIPLLTPIVL DKIEQVIQSK PKRPESYR

Arabidopsis Description

KAB1Probable voltage-gated potassium channel subunit beta [Source:UniProtKB/Swiss-Prot;Acc:O23016]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.