CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015315.1-P	Field mustard	cytosol	91.53	90.0
CDX89825	Canola	plastid	90.31	81.44
AT1G04420.1	Thale cress	plastid	77.24	77.43
PGSC0003DMT400042008	Potato	cytosol, plastid	69.01	71.25
Solyc06g053600.2.1	Tomato	plastid	68.52	70.57
VIT_05s0049g01130.t01	Wine grape	plastid	67.8	66.99
KRH69116	Soybean	plastid	67.8	66.51
TraesCS4D01G078200.1	Wheat	plastid	62.95	64.2
GSMUA_Achr4P04780_001	Banana	plastid	65.38	63.83
TraesCS4A01G235500.1	Wheat	plastid	62.23	63.46
TraesCS4B01G079400.1	Wheat	plastid	61.99	63.21
Os03t0611200-01	Rice	plastid	61.99	63.21
EER93819	Sorghum	plastid	61.02	62.84
TraesCS4A01G235300.1	Wheat	plastid	59.32	61.25
TraesCS4B01G079600.1	Wheat	mitochondrion	46.49	60.95
OQU91377	Sorghum	plastid	59.08	60.25
TraesCS4D01G078600.1	Wheat	plastid	59.32	59.18
HORVU4Hr1G013600.1	Barley	mitochondrion	26.15	53.73
HORVU4Hr1G013530.5	Barley	mitochondrion	62.23	52.99
Zm00001d033338_P002	Maize	plastid	60.29	52.87
Zm00001d043151_P001	Maize	plastid	18.64	37.75
CDY15518	Canola	mitochondrion	22.76	28.66
CDX89797	Canola	cytosol, mitochondrion, plastid	22.76	28.66
CDY18250	Canola	cytosol	22.76	28.66
CDX86614	Canola	mitochondrion	22.52	28.35
CDY70614	Canola	cytosol	22.03	27.0
CDY34139	Canola	cytosol	16.46	26.88
CDY34675	Canola	cytosol	11.38	22.27
CDY14368	Canola	plastid	18.89	21.61
CDY15588	Canola	plastid	19.37	21.22
CDX86514	Canola	plastid	19.37	21.22
CDY20245	Canola	plastid	18.4	20.99
CDY18564	Canola	extracellular, plasma membrane	10.9	12.4

Protein Annotations

Gene3D:3.20.20.100	MapMan:35.1	GO:A0A078FYX1	UniProt:A0A078FYX1	InterPro:Aldo/keto_reductase	EnsemblPlants:CDY18231
ProteinID:CDY18231	ProteinID:CDY18231.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00002761001	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf
PFAM:PF00248	PRINTS:PR00069	PANTHER:PTHR43364	PANTHER:PTHR43364:SF4	SUPFAM:SSF51430	UniParc:UPI0004EDC83A
SEG:seg	:	:	:	:	:

Description

BnaC05g02540DBnaC05g02540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYX1]

Coordinates

chrLK032083:+:439208..442337

Molecular Weight (calculated)

46566.0 Da

IEP (calculated)

7.949

GRAVY (calculated)

-0.302

Length

413 amino acids

Sequence
(BLAST)

001: MFRTSVMAKA STEKAAKKAM EYRKLGDSEL NISEITMGTM TFGEQNTEKE SHEMLSYAVE HGINCIDTAE AYPVPMKKET QGKTDLYISS WLKSQSRDKF
101: VLATKLCGYS ERTAYLRENA EVTRVDAANI KESVEKSLKR LGTDYIDLLQ IHWPDRYVPL FGDNYYDTSK WRASVPFVEQ LRAFQDLINE GKVRYIGVSN
201: ETSYGVMEFV HTAKLEGLPK IVSIQNGYSL LARIRFEVDL VEVCHPKNCN VGLLAYSPLG GGSLSGKYLV TDLEATKNAR LNLFPGFMER YKGSLAKEAT
301: IQYIEVAKKH GLTPVELALG FVRDRPFVTS TIIGATSLEQ LKEDIDAYLV TEGPLSPEVI ADIEAVFRRT IRKKTVKMLN EKKVIGSQDS VVTDTMNIYT
401: KTRYTDLHMV RSV

Best Arabidopsis Sequence Match ( AT1G04420.1 )
(BLAST)

001: MASSYVTYST VTPVVSSSNI RGVFRLAFTR RRVTLSPNAR RRILRVSAKA STKNAMEYRK LGDSDLNISE VTMGTMTFGE QNTEKESHEM LSYAIEEGIN
101: CIDTAEAYPI PMKKETQGKT DLYISSWLKS QQRDKIVLAT KVCGYSERSA YIRDSGEILR VDAANIKESV EKSLKRLGTD YIDLLQIHWP DRYVPLFGDF
201: YYETSKWRPS VPFAEQLRAF QDLIVEGKVR YIGVSNETSY GVTEFVNTAK LEGLPKIVSI QNGYSLLVRC RYEVDLVEVC HPKNCNVGLL AYSPLGGGSL
301: SGKYLATDQE ATKNARLNLF PGYMERYKGS LAKEATIQYV EVAKKYGLTP VELALGFVRD RPFVTSTIIG ATSVKQLKED IDAFLMTERP FSQEVMADID
401: AVFKRFKDPS FV

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ23]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.