Factsheet for TraesCS4D01G078600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
peroxisome 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, peroxisome, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G235300.1	Wheat	plastid	90.1	93.25
TraesCS4B01G079600.1	Wheat	mitochondrion	69.81	91.75
TraesCS4D01G078200.1	Wheat	plastid	80.19	81.98
HORVU4Hr1G013600.1	Barley	mitochondrion	39.13	80.6
Os03t0611200-01	Rice	plastid	75.85	77.53
EER93819	Sorghum	plastid	74.64	77.06
OQU91377	Sorghum	plastid	73.43	75.06
PGSC0003DMT400042008	Potato	cytosol, plastid	65.46	67.75
Solyc06g053600.2.1	Tomato	plastid	65.22	67.33
GSMUA_Achr4P04780_001	Banana	plastid	67.87	66.43
Zm00001d033338_P002	Maize	plastid	74.64	65.61
VIT_05s0049g01130.t01	Wine grape	plastid	66.18	65.55
KRH69116	Soybean	plastid	66.18	65.08
AT1G04420.1	Thale cress	plastid	60.14	60.44
CDY18231	Canola	cytosol	59.18	59.32
Bra015315.1-P	Field mustard	cytosol	58.45	57.62
CDX89825	Canola	plastid	60.14	54.37
Zm00001d043151_P001	Maize	plastid	23.43	47.55
TraesCS3D01G080800.1	Wheat	cytosol	37.92	43.73
TraesCS6D01G378400.1	Wheat	plastid	22.95	28.96
TraesCS2D01G273600.1	Wheat	cytosol, mitochondrion, plastid	12.56	28.57
TraesCS7D01G197100.1	Wheat	cytosol	23.19	28.15
TraesCS5D01G336900.1	Wheat	golgi, plastid	23.43	27.71
TraesCS2D01G336700.1	Wheat	cytosol	23.19	27.67
TraesCS5D01G522300.1	Wheat	cytosol	22.95	27.14
TraesCS2D01G273400.1	Wheat	cytosol	22.22	26.51
TraesCS3D01G230600.1	Wheat	cytosol, golgi, unclear	21.74	26.39
TraesCS2D01G336800.1	Wheat	cytosol, mitochondrion	22.95	26.24
TraesCS2D01G336900.1	Wheat	cytosol, mitochondrion	21.74	26.16
TraesCS7D01G186400.1	Wheat	cytosol	21.98	26.0
TraesCS6D01G127900.1	Wheat	mitochondrion	21.98	25.28
TraesCS1D01G184400.1	Wheat	plastid	20.77	22.93
TraesCS2D01G254700.1	Wheat	cytosol, mitochondrion	19.57	21.66
TraesCS2D01G254500.1	Wheat	mitochondrion, plastid	19.32	21.56

Protein Annotations

EnsemblPlants:TraesCS4D01G078600.1	EnsemblPlantsGene:TraesCS4D01G078600	Gene3D:3.20.20.100	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Aldo/keto_reductase	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	PANTHER:PTHR43364	PANTHER:PTHR43364:SF4	PFAM:PF00248	PRINTS:PR00069	SEG:seg
SUPFAM:SSF51430	TIGR:cd06660	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr4D:+:52751244..52754668

Molecular Weight (calculated)

46974.0 Da

IEP (calculated)

9.173

GRAVY (calculated)

-0.477

Length

414 amino acids

Sequence
(BLAST)

001: MQPKKNQEKY TQQTMLSSFA AISSSYGNAF PGLSAQQLRR WHRRRVRSRV RSAQEPAKLQ YKKLGDSDLL ISEITLGTMT FGEQSTEKES HDMFSYSFDQ
101: GINILDTAEI YPIQPKQETQ GRTDLYVGRW MKSKPRDKVI LATKVSGYSD RTFLRDNAEM VRVDAPNIKE SVEKSLSRLS TDYIDLLHIH WPDRYVALYG
201: EFSYDSTKWR PSVPFEDQLK ALQELIDEGK VRYIGVSNET SYGVMRFVQA AKLHGLPKIV SIQNGYSLLV RCSFEVDLAE VCHPNNCNIG LLAYSPMGSG
301: VLTGKYLDDN SGNSESFRLN LFPGYMQRYN APLAKEATKE YLKVAKKHGL TPVQLALGFV RDRPFTASTI IGATTMDQLK ENIDAFTSAP RPLPPQVLDD
401: IETVFKRYRD PAVL

Best Arabidopsis Sequence Match ( AT1G04420.1 )
(BLAST)

001: MASSYVTYST VTPVVSSSNI RGVFRLAFTR RRVTLSPNAR RRILRVSAKA STKNAMEYRK LGDSDLNISE VTMGTMTFGE QNTEKESHEM LSYAIEEGIN
101: CIDTAEAYPI PMKKETQGKT DLYISSWLKS QQRDKIVLAT KVCGYSERSA YIRDSGEILR VDAANIKESV EKSLKRLGTD YIDLLQIHWP DRYVPLFGDF
201: YYETSKWRPS VPFAEQLRAF QDLIVEGKVR YIGVSNETSY GVTEFVNTAK LEGLPKIVSI QNGYSLLVRC RYEVDLVEVC HPKNCNVGLL AYSPLGGGSL
301: SGKYLATDQE ATKNARLNLF PGYMERYKGS LAKEATIQYV EVAKKYGLTP VELALGFVRD RPFVTSTIIG ATSVKQLKED IDAFLMTERP FSQEVMADID
401: AVFKRFKDPS FV

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ23]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.