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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, unclear, cytosol

Predictor Summary:
  • mitochondrion 2
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, unclear
Any Predictor:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
golgi: 25769308
unclear: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G252400.1 Wheat cytosol 99.12 99.12
TraesCS3A01G222900.1 Wheat cytosol, golgi, nucleus 98.53 98.53
HORVU3Hr1G054640.2 Barley cytosol 97.36 97.36
Os01t0618100-01 Rice plasma membrane 88.27 87.5
TraesCS7D01G186400.1 Wheat cytosol 86.51 84.29
EES03282 Sorghum cytosol 82.4 80.52
Zm00001d044212_P001 Maize cytosol, extracellular, mitochondrion 79.77 79.53
KXG33406 Sorghum mitochondrion 68.92 74.37
KXG32909 Sorghum plastid 80.65 71.61
TraesCS7D01G197100.1 Wheat cytosol 67.74 67.74
VIT_14s0030g01980.t01 Wine grape cytosol 67.45 67.25
VIT_14s0030g01960.t01 Wine grape cytosol 66.28 66.67
VIT_14s0030g02050.t01 Wine grape cytosol 66.28 65.89
VIT_14s0030g02020.t01 Wine grape cytosol 66.86 65.71
Solyc01g097390.2.1 Tomato plastid 65.69 65.12
VIT_05s0020g04130.t01 Wine grape cytosol 65.4 64.64
TraesCS2D01G273600.1 Wheat cytosol, mitochondrion, plastid 34.31 64.29
Solyc01g097380.1.1 Tomato plastid 62.17 63.66
VIT_14s0030g01970.t01 Wine grape cytosol 64.52 63.4
PGSC0003DMT400016488 Potato mitochondrion 43.11 61.0
Solyc09g082720.2.1 Tomato cytosol, plastid 61.58 60.87
PGSC0003DMT400016484 Potato cytosol 61.88 60.63
VIT_14s0030g01990.t01 Wine grape cytosol 61.88 60.11
VIT_14s0030g02060.t01 Wine grape peroxisome 61.58 59.83
Solyc09g082730.2.1 Tomato cytosol 59.82 58.96
VIT_14s0030g02010.t01 Wine grape extracellular, mitochondrion 18.48 56.76
TraesCS2D01G273400.1 Wheat cytosol 55.72 54.76
TraesCS5D01G522300.1 Wheat cytosol 55.43 54.0
TraesCS5D01G336900.1 Wheat golgi, plastid 55.13 53.71
TraesCS6D01G127900.1 Wheat mitochondrion 56.6 53.61
TraesCS2D01G336700.1 Wheat cytosol 52.79 51.87
TraesCS2D01G336900.1 Wheat cytosol, mitochondrion 51.03 50.58
TraesCS2D01G336800.1 Wheat cytosol, mitochondrion 51.91 48.9
TraesCS2D01G254500.1 Wheat mitochondrion, plastid 31.09 28.57
TraesCS2D01G254700.1 Wheat cytosol, mitochondrion 29.33 26.74
TraesCS3D01G080800.1 Wheat cytosol 27.27 25.91
TraesCS6D01G378400.1 Wheat plastid 24.63 25.61
TraesCS1D01G184400.1 Wheat plastid 24.05 21.87
TraesCS4D01G078600.1 Wheat plastid 26.39 21.74
TraesCS4D01G078200.1 Wheat plastid 25.81 21.73
Protein Annotations
EnsemblPlants:TraesCS3D01G230600.1EnsemblPlantsGene:TraesCS3D01G230600Gene3D:3.20.20.100InterPro:IPR036812InterPro:NADP_OxRdtase_domInterPro:NADP_OxRdtase_dom_sf
PANTHER:PTHR43625PANTHER:PTHR43625:SF2PFAM:PF00248SEG:segSUPFAM:SSF51430TIGR:cd06660
MapMan:50.1.1:::::
Description
No Description!
Coordinates
chr3D:+:313893289..313895287
Molecular Weight (calculated)
37797.2 Da
IEP (calculated)
6.849
GRAVY (calculated)
-0.358
Length
341 amino acids
Sequence
(BLAST)
001: MAQTPPIPRV SLGTQGLEVS KLGFGCMGLT GSYNSPVEDD AGVAVITHAF RRGVTFFDTS DVYGPHANEI LLGKALKQLP REQVQVATKF GIQRDAQGKS
101: TICGRPEYVR ACCEASLHRL GVDHIDLYYQ HRIDTTIPIE DTIGELKKLV EEGKVKYIGL SEASPDTIRR AHAVHPISAV QMEWSLWARD IEPEIVPLCR
201: ELGIGIVPYS PIARGFFGGR GVTQQVSAES SLKGHPRFSA ENLEKNKQLY LKMEELAKKH QCSPAQLALS WVLHQGDDVV PIPGTTKIKN LDSNIDSLKV
301: RLTEDDLKEI SNEIREEDVA GGRQYTSFAK FTWNYADTPK K
Best Arabidopsis Sequence Match ( AT1G60680.1 )
(BLAST)
001: MAEACRVRRM KLGSQGLEVS AQGLGCMALS ARYGAPKPET DAIALLHHAI NSGVTFFDTS DMYGPETNEL LLGKALKDGV KEKVELATKF GFFIVEGEIS
101: EVRGDPEYVR AACEASLKRL DIACIDLYYQ HRIDTRVPIE ITMRELKKLV EEGKIKYIGL SEASASTIRR AHAVHPITAV QIEWSLWSRD AEEDIIPICR
201: ELGIGIVAYS PLGRGFLAAG PKLAENLEND DFRKTLPRFQ QENVDHNKIL FEKVSAMAEK KGCTPAQLAL AWVHHQGDDV CPIPGTTKIE NLNQNIRALS
301: VKLTPEEISE LDSLAKPESV KGERYMASMS TFKNSNTPPL SSWKAT
Arabidopsis Description
AGD2Probable aldo-keto reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84M96]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.