Factsheet for Solyc01g097390.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 4
vacuole 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117
plastid: 26371478

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g097380.1.1	Tomato	plastid	90.7	93.69
VIT_14s0030g02050.t01	Wine grape	cytosol	70.06	70.26
EER91589	Sorghum	cytosol	69.19	69.79
KRH68728	Soybean	cytosol, nucleus	68.6	69.62
VIT_14s0030g02020.t01	Wine grape	cytosol	70.06	69.45
VIT_14s0030g01980.t01	Wine grape	cytosol	68.9	69.3
Os10t0419100-01	Rice	cytosol, plasma membrane	68.9	69.1
HORVU7Hr1G040080.2	Barley	cytosol	14.53	68.49
TraesCS7D01G197100.1	Wheat	cytosol	67.15	67.74
TraesCS7B01G101300.1	Wheat	cytosol	65.99	67.56
TraesCS7A01G195600.1	Wheat	cytosol	66.57	67.16
VIT_14s0030g01970.t01	Wine grape	cytosol	67.73	67.15
HORVU7Hr1G039930.1	Barley	cytosol	65.99	66.57
TraesCS3D01G230600.1	Wheat	cytosol, golgi, unclear	65.12	65.69
TraesCS3B01G252400.1	Wheat	cytosol	65.12	65.69
KRH34080	Soybean	cytosol	64.24	65.19
HORVU3Hr1G054640.2	Barley	cytosol	64.24	64.81
TraesCS3A01G222900.1	Wheat	cytosol, golgi, nucleus	64.24	64.81
Solyc09g082720.2.1	Tomato	cytosol, plastid	64.83	64.64
OQU87178	Sorghum	cytosol	64.53	64.53
Solyc09g082730.2.1	Tomato	cytosol	64.83	64.45
Os01t0618100-01	Rice	plasma membrane	64.24	64.24
VIT_14s0030g01990.t01	Wine grape	cytosol	65.12	63.82
VIT_14s0030g02060.t01	Wine grape	peroxisome	65.12	63.82
TraesCS7A01G184900.1	Wheat	cytosol	61.92	62.65
Zm00001d044212_P001	Maize	cytosol, extracellular, mitochondrion	61.92	62.28
TraesCS7A01G185000.1	Wheat	cytosol	62.21	61.85
TraesCS7B01G089600.1	Wheat	cytosol	61.92	61.74
TraesCS7B01G090000.1	Wheat	cytosol	62.21	61.67
TraesCS7D01G186400.1	Wheat	cytosol	62.5	61.43
VIT_14s0030g02010.t01	Wine grape	extracellular, mitochondrion	19.77	61.26
EES03282	Sorghum	cytosol	61.92	61.03
Os04t0338100-01	Rice	cytosol, nucleus	19.48	59.82
TraesCS7B01G089800.1	Wheat	cytosol	54.65	58.75
Solyc09g097960.2.1	Tomato	cytosol	57.27	56.94
Solyc09g097970.2.1	Tomato	cytosol, extracellular	56.98	56.65
KXG32909	Sorghum	plastid	62.79	56.25
Solyc09g097980.2.1	Tomato	cytosol, extracellular	57.27	56.13
KRH07938	Soybean	cytosol, extracellular, plastid	17.15	55.66
Solyc09g098090.2.1	Tomato	cytosol	55.81	55.65
KXG33406	Sorghum	mitochondrion	50.87	55.38
Solyc09g098000.2.1	Tomato	cytosol	56.1	55.3
Solyc01g065490.2.1	Tomato	cytosol	49.42	53.29
Zm00001d011363_P002	Maize	cytosol	54.07	52.25
Zm00001d032921_P001	Maize	cytosol	66.57	36.41
Solyc09g097950.1.1	Tomato	cytosol	13.95	32.21
Solyc07g043570.2.1	Tomato	plastid	27.03	26.2
Solyc12g098150.1.1	Tomato	plastid	24.13	25.15
Solyc09g074310.2.1	Tomato	endoplasmic reticulum, extracellular	25.29	24.23
Solyc06g053600.2.1	Tomato	plastid	26.45	22.69
Solyc03g082560.2.1	Tomato	nucleus	23.55	21.89

Protein Annotations

EnsemblPlants:Solyc01g097390.2.1	EnsemblPlantsGene:Solyc01g097390.2	Gene3D:3.20.20.100	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf
PANTHER:PTHR43625	PANTHER:PTHR43625:SF2	PFAM:PF00248	SUPFAM:SSF51430	UniParc:UPI0002768021	UniProt:K4B0C6
MapMan:50.1.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1:+:88267919..88272095

Molecular Weight (calculated)

38096.1 Da

IEP (calculated)

7.612

GRAVY (calculated)

-0.192

Length

344 amino acids

Sequence
(BLAST)

001: MADAVEMPRV KLGSQGLEVS KLGFGCMGLT GVYNSPVHEA EGIAIIKEAF SKGVTFFDTS DVYGMDHANE YLVGKALKQL PRETIQLATK FGIYKIEPTK
101: VTVKGTPEYV RSCCEASLKR LQVDYIDLYY VHRIDTKVPI EETMVELKKL VEEGKIKYIG LSEAHPETIR RAHAVHPITA VQQEYSLWTR DIEDDIIPVC
201: RELGIGIVPY SPVGRGLFAG KAVVESLPAN SFLTTHPRFT GENFEKNKSI YFRMGGIAKK HGCSPAQLAI SWVLHQGNDI VPIPGTTKIK NLHDNIGSVR
301: VKLTEEDIKE LSDAVPVSEV AGQRIGEALY KSSYKFSITP PQTK

Best Arabidopsis Sequence Match ( AT1G60680.1 )
(BLAST)

001: MAEACRVRRM KLGSQGLEVS AQGLGCMALS ARYGAPKPET DAIALLHHAI NSGVTFFDTS DMYGPETNEL LLGKALKDGV KEKVELATKF GFFIVEGEIS
101: EVRGDPEYVR AACEASLKRL DIACIDLYYQ HRIDTRVPIE ITMRELKKLV EEGKIKYIGL SEASASTIRR AHAVHPITAV QIEWSLWSRD AEEDIIPICR
201: ELGIGIVAYS PLGRGFLAAG PKLAENLEND DFRKTLPRFQ QENVDHNKIL FEKVSAMAEK KGCTPAQLAL AWVHHQGDDV CPIPGTTKIE NLNQNIRALS
301: VKLTPEEISE LDSLAKPESV KGERYMASMS TFKNSNTPPL SSWKAT

Arabidopsis Description

AGD2Probable aldo-keto reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84M96]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.