Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g097960.2.1 | Tomato | cytosol | 89.31 | 89.31 |
| Solyc09g097980.2.1 | Tomato | cytosol, extracellular | 88.44 | 87.18 |
| Solyc09g098000.2.1 | Tomato | cytosol | 81.21 | 80.52 |
| Bra027140.1-P | Field mustard | cytosol, nucleus, peroxisome | 74.86 | 77.54 |
| AT1G60710.1 | Thale cress | cytosol | 76.88 | 77.1 |
| AT1G60750.1 | Thale cress | cytosol | 71.97 | 75.45 |
| AT1G60690.1 | Thale cress | cytosol | 75.14 | 75.36 |
| CDY70614 | Canola | cytosol | 72.25 | 74.18 |
| AT1G60680.1 | Thale cress | cytosol, mitochondrion | 73.99 | 73.99 |
| Bra031486.1-P | Field mustard | cytosol | 71.68 | 73.81 |
| AT1G10810.1 | Thale cress | mitochondrion, peroxisome, plastid | 72.25 | 72.67 |
| Bra031485.1-P | Field mustard | cytosol, mitochondrion | 75.14 | 72.22 |
| AT1G60730.3 | Thale cress | cytosol | 75.72 | 71.78 |
| Bra027135.1-P | Field mustard | cytosol, mitochondrion, nucleus | 51.73 | 70.2 |
| Bra027138.1-P | Field mustard | cytosol | 50.58 | 69.44 |
| Bra027142.1-P | Field mustard | cytosol | 73.41 | 69.21 |
| Bra027134.1-P | Field mustard | cytosol | 68.21 | 69.21 |
| CDY34139 | Canola | cytosol | 49.71 | 67.98 |
| Bra027139.1-P | Field mustard | cytosol | 49.71 | 67.98 |
| CDY34675 | Canola | cytosol | 41.04 | 67.3 |
| Solyc09g098090.2.1 | Tomato | cytosol | 66.76 | 66.96 |
| Solyc01g065490.2.1 | Tomato | cytosol | 60.98 | 66.14 |
| Solyc01g097380.1.1 | Tomato | plastid | 54.91 | 57.06 |
| Solyc01g097390.2.1 | Tomato | plastid | 56.65 | 56.98 |
| Solyc09g082720.2.1 | Tomato | cytosol, plastid | 53.47 | 53.62 |
| Solyc09g082730.2.1 | Tomato | cytosol | 53.18 | 53.18 |
| Solyc09g097950.1.1 | Tomato | cytosol | 21.68 | 50.34 |
| Solyc07g043570.2.1 | Tomato | plastid | 29.77 | 29.01 |
| Solyc12g098150.1.1 | Tomato | plastid | 25.43 | 26.67 |
| Solyc09g074310.2.1 | Tomato | endoplasmic reticulum, extracellular | 26.59 | 25.63 |
| Solyc03g082560.2.1 | Tomato | nucleus | 25.72 | 24.05 |
| Solyc06g053600.2.1 | Tomato | plastid | 26.59 | 22.94 |
Protein Annotations
| EnsemblPlants:Solyc09g097970.2.1 | EnsemblPlantsGene:Solyc09g097970.2 | Gene3D:3.20.20.100 | InterPro:IPR036812 | InterPro:NADP_OxRdtase_dom | InterPro:NADP_OxRdtase_dom_sf |
| PANTHER:PTHR43625 | PANTHER:PTHR43625:SF18 | PFAM:PF00248 | SUPFAM:SSF51430 | UniParc:UPI000276BF80 | UniProt:K4CWW9 |
| MapMan:50.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr9:+:71920092..71923786
Molecular Weight (calculated)
37768.2 Da
IEP (calculated)
6.246
GRAVY (calculated)
-0.237
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEGTKVGR IKLGSEGLEV SAQGLGCMGM SAFYGPPKPD SDMVQLIHHA INSGVTFLDT SDVYGPHTNE ILLGKALMGG MRERVELATK FAVSFAEGKM
101: QVRGEPAYVR AACEASLKRL DVDCIDLYYQ HRIDTRVPIE VTVGELKKLV EEGKIKYIGL SEASASTIRR AHAVHPITAV QLEWSLWSRD VEEDIVPTCR
201: ELGIGIVAYS PLGRGFLSSG PKLLEDCSNE DFRKYLPRFQ GENLEHNKKL YERICQIAAK KGCTPSQLAL AWVHHQGNDV CPIPGTTKIE NLNQNIGALS
301: IKLTSEDMTE LESIASANAV QGDRYGSAAA TYKDSETPPL SAWKAT
101: QVRGEPAYVR AACEASLKRL DVDCIDLYYQ HRIDTRVPIE VTVGELKKLV EEGKIKYIGL SEASASTIRR AHAVHPITAV QLEWSLWSRD VEEDIVPTCR
201: ELGIGIVAYS PLGRGFLSSG PKLLEDCSNE DFRKYLPRFQ GENLEHNKKL YERICQIAAK KGCTPSQLAL AWVHHQGNDV CPIPGTTKIE NLNQNIGALS
301: IKLTSEDMTE LESIASANAV QGDRYGSAAA TYKDSETPPL SAWKAT
001: MAEACGVRRM KLGSQGLEVS AQGLGCMGLS AFYGAPKPEN EAIALIHHAI HSGVTLLDTS DIYGPETNEV LLGKALKDGV REKVELATKF GISYAEGKRE
101: VRGDPEYVRA ACEASLKRLD IACIDLYYQH RVDTRVPIEI TMGELKKLVE EGKIKYIGLS EASASTIRRA HAVHPITAVQ IEWSLWTRDV EEEIIPTCRE
201: LGIGIVAYSP LGRGFFASGP KLVENLEKDD FRKALPRFQE ENLDHNKIVY EKVCAISEKK GCTPGQLALA WVHHQGDDVC PIPGTTKIEN LKQNIGALSV
301: KLTPEEMTEL EAIAQPGFVK GDRYSNMIPT FKNAETPPLS AWKAA
101: VRGDPEYVRA ACEASLKRLD IACIDLYYQH RVDTRVPIEI TMGELKKLVE EGKIKYIGLS EASASTIRRA HAVHPITAVQ IEWSLWTRDV EEEIIPTCRE
201: LGIGIVAYSP LGRGFFASGP KLVENLEKDD FRKALPRFQE ENLDHNKIVY EKVCAISEKK GCTPGQLALA WVHHQGDDVC PIPGTTKIEN LKQNIGALSV
301: KLTPEEMTEL EAIAQPGFVK GDRYSNMIPT FKNAETPPLS AWKAA
Arabidopsis Description
ATB2Probable aldo-keto reductase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZN2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.